C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dermatan sulfate epimerase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359564 DSE-201 ENSG00000111817 9606 + 6:116370947-116438277 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359564
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359564 13.837±0.00 7.062±0.00 5.719±2.65 5.291±3.41 2.400±1.20 4.327±2.22 3.250±1.65 7.075±3.07 1.424±0.00 9.102±3.03 7.812±1.56 5.717±1.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XK CIL_0005XK_0001 CGP 6:116254173-116441261

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0005975 TAS carbohydrate metabolic process
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030204 TAS chondroitin sulfate metabolic process
GO:0030206 IEA chondroitin sulfate biosynthetic process
GO:0030208 IDA dermatan sulfate biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0047757 IDA chondroitin-glucuronate 5-epimerase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048010 Dse-201 protein_coding Mus_musculus 0 3382

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