C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dermatan sulfate epimerase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000331677 DSE-002 ENSG00000111817 9606 + 6:116370358-116441261 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonLungENST00000331677
Transcript ID Adipose Breast Colon Lung
ENST00000331677 1.916±0.00 1.474±0.00 1.171±0.00 1.268±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XK CIL_0005XK_0001 CGP 6:116254173-116441261

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0005975 TAS carbohydrate metabolic process
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030204 TAS chondroitin sulfate metabolic process
GO:0030206 IEA chondroitin sulfate biosynthetic process
GO:0030208 IDA dermatan sulfate biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0047757 IDA chondroitin-glucuronate 5-epimerase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048010 Dse-201 protein_coding Mus_musculus 0 3382

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