C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear receptor coactivator 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000111912 NCOA7 9606 + 6:125781161-125932030 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000229634 NCOA7-012 125790965-125929027 protein_coding
  ENST00000368357 NCOA7-005 125781161-125931111 protein_coding
  ENST00000392477 NCOA7-201 125790763-125932030 protein_coding
  ENST00000417494 NCOA7-001 125790940-125881203 protein_coding
  ENST00000419660 NCOA7-010 125815218-125874968 protein_coding
  ENST00000428318 NCOA7-009 125810135-125855240 protein_coding
  ENST00000433571 NCOA7-006 125899909-125927758 processed_transcript
  ENST00000438495 NCOA7-002 125919305-125931111 protein_coding
  ENST00000444128 NCOA7-003 125919305-125931111 protein_coding
  ENST00000453302 NCOA7-008 125790940-125855240 protein_coding
  ENST00000487635 NCOA7-011 125815218-125855590 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000229634ENST00000368357ENST00000392477ENST00000433571ENST00000438495ENST00000444128ENST00000453302
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000229634 3.923±0.00 N/A 3.431±0.00 7.735±4.49 1.896±0.12 2.301±1.48 1.155±0.00 N/A 1.322±0.00 2.022±0.00 0.857±0.31 2.777±0.00 1.068±0.50 1.640±0.06
ENST00000368357 N/A N/A 1.639±0.00 N/A 1.731±0.00 0.914±0.00 0.735±0.00 0.682±0.00 1.967±0.00 2.650±0.00 N/A N/A 0.949±0.49 1.223±0.45
ENST00000392477 N/A 1.298±0.00 N/A 6.895±0.00 0.804±0.17 1.102±0.00 N/A 0.467±0.00 0.822±0.27 N/A N/A 2.682±0.00 0.289±0.00 0.603±0.18
ENST00000433571 N/A N/A 14.319±0.00 N/A N/A 6.268±0.00 1.233±0.00 8.552±0.00 N/A N/A N/A N/A N/A N/A
ENST00000438495 N/A 3.324±0.00 2.786±0.00 9.449±3.75 4.143±0.79 6.429±0.00 1.558±0.00 10.886±0.00 2.720±0.00 N/A 0.802±0.65 17.124±11.18 2.142±0.13 2.491±0.00
ENST00000444128 N/A N/A N/A N/A N/A N/A N/A 7.250±0.00 N/A N/A N/A N/A N/A 1.045±0.00
ENST00000453302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.278±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008OD CIL_0008OD_0001 VISTA 6:125236534-125837593
CIL_0008OI CIL_0008OI_0001 VISTA 6:125254869-125857286
CIL_0008OH CIL_0008OH_0001 VISTA 6:125258053-125858974
CIL_0008OG CIL_0008OG_0001 VISTA 6:125287797-125889208

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0030374 IDA ligand-dependent nuclear receptor transcription coactivator activity
GO:0035257 IDA nuclear hormone receptor binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074924 NCOA7 (1 of 2) nuclear receptor coactivator 7 protein_coding Danio_rerio
ENSMUSG00000039697 Ncoa7 nuclear receptor coactivator 7 protein_coding Mus_musculus

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