C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor coactivator 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392477 NCOA7-201 ENSG00000111912 9606 + 6:125790763-125932030 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverOvaryPlacentaTestisENST00000392477
Transcript ID Adrenal Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000392477 1.298±0.00 6.895±0.00 0.804±0.17 1.102±0.00 0.467±0.00 0.822±0.27 2.682±0.00 0.289±0.00 0.603±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008OD CIL_0008OD_0001 VISTA 6:125236534-125837593
CIL_0008OI CIL_0008OI_0001 VISTA 6:125254869-125857286
CIL_0008OH CIL_0008OH_0001 VISTA 6:125258053-125858974
CIL_0008OG CIL_0008OG_0001 VISTA 6:125287797-125889208

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0030374 IDA ligand-dependent nuclear receptor transcription coactivator activity
GO:0035257 IDA nuclear hormone receptor binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068567 Ncoa7-201 protein_coding Mus_musculus 0 3086
ENSMUST00000092610 Ncoa7-202 protein_coding Mus_musculus 0 1103

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