C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008OG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm766 VISTA 9606 6:125287797-125889208
GeneTranscriptPositionBiotype
ENSG00000111906 (HDDC2)
HD domain containing 2 		ENST00000318787 (HDDC2-001) 125275350-125301974 nonsense_mediated_decay
ENST00000398153 (HDDC2-002) 125275886-125301975 protein_coding
ENST00000608284 (HDDC2-005) 125297487-125302078 protein_coding
ENST00000608295 (HDDC2-004) 125275882-125301937 protein_coding
ENST00000608456 (HDDC2-010) 125219962-125276217 processed_transcript
ENST00000608461 (HDDC2-007) 125276955-125301958 retained_intron
ENST00000608532 (HDDC2-008) 125277079-125293231 retained_intron
ENST00000609021 (HDDC2-003) 125275886-125279414 retained_intron
ENST00000609477 (HDDC2-009) 125221928-125301958 nonsense_mediated_decay
ENST00000609574 (HDDC2-006) 125300277-125302072 processed_transcript
ENSG00000111912 (NCOA7)
nuclear receptor coactivator 7 		ENST00000229634 (NCOA7-012) 125790965-125929027 protein_coding
ENST00000368357 (NCOA7-005) 125781161-125931111 protein_coding
ENST00000392477 (NCOA7-201) 125790763-125932030 protein_coding
ENST00000417494 (NCOA7-001) 125790940-125881203 protein_coding
ENST00000419660 (NCOA7-010) 125815218-125874968 protein_coding
ENST00000428318 (NCOA7-009) 125810135-125855240 protein_coding
ENST00000433571 (NCOA7-006) 125899909-125927758 processed_transcript
ENST00000438495 (NCOA7-002) 125919305-125931111 protein_coding
ENST00000444128 (NCOA7-003) 125919305-125931111 protein_coding
ENST00000453302 (NCOA7-008) 125790940-125855240 protein_coding
ENST00000487635 (NCOA7-011) 125815218-125855590 processed_transcript
ENSG00000135547 (HEY2)
hes-related family bHLH transcription factor with YRPW motif 2 		ENST00000368364 (HEY2-001) 125749580-125761269 protein_coding
ENST00000368365 (HEY2-002) 125747664-125761269 protein_coding
ENSG00000222445 (RN7SKP56)
RNA, 7SK small nuclear pseudogene 56 		ENST00000410513 (RN7SKP56-201) 125875168-125875498 misc_RNA
ENSG00000224506 (RP1-293L8.2)
 ENST00000423208 (RP1-293L8.2-001) 125674353-125720218 lincRNA
ENSG00000226409 (RP11-735G4.1)
 ENST00000422227 (RP11-735G4.1-001) 125370211-125374324 antisense
ENSG00000228704 (RP11-138M12.1)
 ENST00000430672 (RP11-138M12.1-001) 125425627-125445183 lincRNA
ENSG00000232131 (NCOA7-AS1)
NCOA7 antisense RNA 1 		ENST00000429007 (NCOA7-AS1-001) 125797856-125818858 antisense
ENSG00000237742 (RP11-624M8.1)
 ENST00000427852 (RP11-624M8.1-002) 125578567-125745028 antisense
ENST00000432121 (RP11-624M8.1-003) 125720343-125749186 antisense
ENST00000451660 (RP11-624M8.1-001) 125578567-125749186 antisense
ENST00000606001 (RP11-624M8.1-005) 125718236-125749190 antisense
ENST00000606334 (RP11-624M8.1-004) 125578558-125745610 antisense
CIL_0008OG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm766 VISTA 10090 10:30697657-31298999
GeneTranscriptPositionBiotype
ENSMUSG00000019789 (Hey2)
hairy/enhancer-of-split related with YRPW motif 2 		ENSMUST00000019924 (Hey2-001) 30832359-30842801 protein_coding
ENSMUSG00000039684 (Gm5422)
predicted pseudogene 5422 		ENSMUST00000050717 (Gm5422-201) 31248140-31251045 protein_coding
ENSMUSG00000039697 (Ncoa7)
nuclear receptor coactivator 7 		ENSMUST00000068567 (Ncoa7-201) 30645584-30803107 protein_coding
ENSMUST00000092610 (Ncoa7-202) 30645584-30655867 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008OG_0001ENSG00000111906ENST00000318787ENST00000398153ENST00000608284ENST00000608295ENST00000608456ENST00000608461ENST00000608532ENST00000609021ENST00000609477ENST00000609574ENSG00000111912ENST00000229634ENST00000368357ENST00000392477ENST00000417494ENST00000419660ENST00000428318ENST00000433571ENST00000438495ENST00000444128ENST00000453302ENST00000487635ENSG00000135547ENST00000368364ENST00000368365ENSG00000222445ENST00000410513ENSG00000224506ENST00000423208ENSG00000226409ENST00000422227ENSG00000228704ENST00000430672ENSG00000232131ENST00000429007ENSG00000237742ENST00000427852ENST00000432121ENST00000451660ENST00000606001ENST00000606334CIL_0008OG_0002ENSMUSG00000019789ENSMUST00000019924ENSMUSG00000039684ENSMUST00000050717ENSMUSG00000039697ENSMUST00000068567ENSMUST00000092610
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008OG_0001ENSG00000111906ENST00000318787ENST00000398153ENST00000608461ENST00000609477ENSG00000111912ENST00000229634ENST00000368357ENST00000392477ENST00000433571ENST00000438495ENST00000444128ENST00000453302ENSG00000135547ENST00000368364ENST00000368365ENSG00000222445ENST00000410513ENSG00000224506ENST00000423208ENSG00000226409ENST00000422227ENSG00000228704ENST00000430672ENSG00000232131ENST00000429007ENSG00000237742ENST00000427852ENST00000432121ENST00000451660ENST00000606001ENST00000606334CIL_0008OG_0002ENSMUSG00000019789ENSMUST00000019924ENSMUSG00000039684ENSMUST00000050717ENSMUSG00000039697ENSMUST00000068567ENSMUST00000092610
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111906 ENST00000318787 N/A N/A 2.176±0.00 7.862±0.00 N/A 1.973±0.00 2.066±0.00 N/A 3.869±0.00 4.435±0.00 4.514±0.00 4.934±0.00 3.330±0.00 N/A
ENST00000398153 24.964±0.00 59.618±0.00 4.632±0.00 34.447±25.43 26.035±19.31 18.794±14.63 23.015±16.92 26.209±24.00 6.360±0.20 17.406±8.28 20.019±11.13 39.451±16.22 21.006±3.15 61.786±0.35
ENST00000608284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.475±0.00 19.985±0.00 N/A
ENST00000608532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609477 N/A N/A N/A N/A 6.880±0.00 N/A N/A N/A N/A N/A 16.789±0.00 N/A N/A N/A
ENST00000609574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000111912 ENST00000229634 3.923±0.00 N/A 3.431±0.00 7.735±4.49 1.896±0.12 2.301±1.48 1.155±0.00 N/A 1.322±0.00 2.022±0.00 0.857±0.31 2.777±0.00 1.068±0.50 1.640±0.06
ENST00000368357 N/A N/A 1.639±0.00 N/A 1.731±0.00 0.914±0.00 0.735±0.00 0.682±0.00 1.967±0.00 2.650±0.00 N/A N/A 0.949±0.49 1.223±0.45
ENST00000392477 N/A 1.298±0.00 N/A 6.895±0.00 0.804±0.17 1.102±0.00 N/A 0.467±0.00 0.822±0.27 N/A N/A 2.682±0.00 0.289±0.00 0.603±0.18
ENST00000417494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433571 N/A N/A 14.319±0.00 N/A N/A 6.268±0.00 1.233±0.00 8.552±0.00 N/A N/A N/A N/A N/A N/A
ENST00000438495 N/A 3.324±0.00 2.786±0.00 9.449±3.75 4.143±0.79 6.429±0.00 1.558±0.00 10.886±0.00 2.720±0.00 N/A 0.802±0.65 17.124±11.18 2.142±0.13 2.491±0.00
ENST00000444128 N/A N/A N/A N/A N/A N/A N/A 7.250±0.00 N/A N/A N/A N/A N/A 1.045±0.00
ENST00000453302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.278±0.00
ENST00000487635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135547 ENST00000368364 1.304±0.00 1.079±0.00 N/A 1.388±0.36 1.818±1.52 0.713±0.56 4.255±2.00 1.388±0.00 0.557±0.14 0.964±0.44 2.699±0.38 1.711±1.16 1.337±0.46 6.591±0.09
ENST00000368365 N/A N/A 0.603±0.00 N/A 0.055±0.00 0.283±0.00 N/A 1.301±0.00 0.215±0.00 0.254±0.00 N/A 0.515±0.00 N/A N/A
ENSG00000222445 ENST00000410513 N/A N/A N/A 0.047±0.00 0.235±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224506 ENST00000423208 0.046±0.00 0.044±0.00 0.177±0.00 0.041±0.00 0.044±0.00 0.026±0.00 N/A 0.031±0.00 0.019±0.01 0.020±0.00 N/A 0.082±0.04 N/A 0.029±0.01
ENSG00000226409 ENST00000422227 0.015±0.00 0.090±0.00 N/A N/A 0.101±0.00 0.040±0.00 0.014±0.00 N/A 0.142±0.00 0.524±0.00 0.198±0.00 0.066±0.04 0.068±0.03 0.194±0.09
ENSG00000228704 ENST00000430672 N/A 0.157±0.00 N/A N/A 0.103±0.00 0.572±0.00 N/A N/A N/A N/A N/A 1.678±0.00 N/A 0.253±0.02
ENSG00000232131 ENST00000429007 N/A N/A N/A 0.026±0.00 0.025±0.00 N/A N/A N/A N/A 0.168±0.00 N/A 0.089±0.00 N/A 0.091±0.00
ENSG00000237742 ENST00000427852 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.157±0.00 0.348±0.00 0.295±0.11 N/A N/A
ENST00000432121 N/A N/A N/A 0.120±0.00 0.098±0.00 N/A N/A N/A N/A N/A 0.274±0.00 N/A 0.124±0.01 N/A
ENST00000451660 N/A N/A N/A N/A N/A N/A N/A N/A 0.312±0.00 N/A N/A 0.135±0.09 N/A 0.260±0.17
ENST00000606001 N/A 0.016±0.00 0.242±0.00 N/A N/A 0.008±0.00 N/A N/A N/A N/A N/A N/A N/A 0.016±0.00
ENST00000606334 0.090±0.00 0.140±0.00 N/A 0.150±0.00 N/A N/A N/A 0.740±0.00 N/A N/A N/A 0.286±0.00 N/A 0.246±0.15
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019789 ENSMUST00000019924 2.704±1.17 2.916±1.05 0.872±0.02 2.869±1.21 2.107±0.84 2.591±1.03 2.250±0.41 1.181±0.63 0.351±0.13 4.116±1.36 0.142±0.03 41.192±19.74 0.515±0.13 0.441±0.15
ENSMUSG00000039684 ENSMUST00000050717 0.504±0.05 0.180±0.05 0.186±0.17 0.470±0.31 0.203±0.06 0.146±0.09 0.282±0.05 0.154±0.04 0.158±0.19 0.134±0.03 0.025±0.01 0.652±0.52 0.038±0.02 0.435±0.20
ENSMUSG00000039697 ENSMUST00000068567 1.250±0.19 1.729±0.38 2.286±0.29 3.542±1.94 1.295±0.20 0.481±0.06 0.245±0.11 4.237±1.49 2.522±3.16 1.497±0.42 0.170±0.11 3.381±1.80 2.442±0.77 1.006±0.31
ENSMUST00000092610 2.400±1.34 0.539±0.04 4.776±0.32 N/A 1.456±0.87 3.138±1.17 0.478±0.22 5.538±2.17 0.790±1.09 1.563±0.30 0.313±0.08 3.876±1.19 0.912±0.09 N/A

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