C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PR domain containing 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112238 PRDM13 9606 + 6:99606730-99615578 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000369214 PRDM13-001 99606774-99615578 nonsense_mediated_decay
  ENST00000369215 PRDM13-002 99606730-99614759 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposePlacentaTestisENST00000369214ENST00000369215
Transcript ID Adipose Placenta Testis
ENST00000369214 N/A 0.023±0.00 0.201±0.13
ENST00000369215 0.052±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YD CIL_0001YD_0002 CGP 6:99606730-99994247

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008168 IEA methyltransferase activity
GO:0022008 IEA neurogenesis
GO:0032259 IEA methylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078701 prdm13 PR domain containing 13 protein_coding Danio_rerio
ENSMUSG00000040478 Prdm13 PR domain containing 13 protein_coding Mus_musculus

Loading