C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PR domain containing 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369215 PRDM13-002 ENSG00000112238 9606 + 6:99606730-99614759 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeENST00000369215
Transcript ID Adipose
ENST00000369215 0.052±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YD CIL_0001YD_0002 CGP 6:99606730-99994247

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008168 IEA methyltransferase activity
GO:0022008 IEA neurogenesis
GO:0032259 IEA methylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095141 Prdm13-201 protein_coding Mus_musculus 0 1131
ENSMUST00000144160 Prdm13-004 processed_transcript Mus_musculus 0 876
ENSMUST00000076206 Prdm13-001 protein_coding Mus_musculus 0 837
ENSMUST00000139568 Prdm13-005 retained_intron Mus_musculus 0 669
ENSMUST00000149516 Prdm13-003 processed_transcript Mus_musculus 0 534
ENSMUST00000139255 Prdm13-002 processed_transcript Mus_musculus 0 333

Loading