C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: activating signal cointegrator 1 complex subunit 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112249 ASCC3 9606 - 6:100508194-100881372 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324696 ASCC3-003 100647288-100881372 nonsense_mediated_decay
  ENST00000324723 ASCC3-006 100848420-100881348 protein_coding
  ENST00000369143 ASCC3-002 100856303-100881311 protein_coding
  ENST00000369162 ASCC3-001 100508194-100881364 protein_coding
  ENST00000468245 ASCC3-005 100848004-100881301 retained_intron
  ENST00000518006 ASCC3-007 100509218-100510308 retained_intron
  ENST00000522650 ASCC3-004 100715130-100881364 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000324696ENST00000369143ENST00000369162ENST00000468245
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000324696 N/A N/A N/A N/A N/A N/A N/A N/A 2.536±0.00 N/A N/A N/A N/A N/A
ENST00000369143 0.466±0.00 1.113±0.00 0.648±0.00 0.494±0.00 0.939±0.41 N/A N/A N/A 0.487±0.00 N/A N/A 0.974±0.37 1.899±0.00 2.600±0.00
ENST00000369162 2.133±0.00 0.503±0.00 0.331±0.00 1.455±0.00 1.357±0.50 2.725±0.00 1.018±0.34 2.059±1.49 3.742±0.00 2.477±2.03 0.714±0.00 1.589±0.77 3.617±2.11 3.733±2.47
ENST00000468245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.962±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007NG CIL_0007NG_0001 UCNEbase 6:99749802-100612540
CIL_0008SA CIL_0008SA_0001 VISTA 6:99910036-100511515
CIL_00097X CIL_00097X_0001 VISTA 6:100156252-100757191
CIL_0008V6 CIL_0008V6_0001 VISTA 6:100225935-100826717

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005622 IDA intracellular
GO:0005634 TAS nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0006307 IDA DNA dealkylation involved in DNA repair
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008283 IMP cell proliferation
GO:0016020 IDA membrane
GO:0016787 IEA hydrolase activity
GO:0032508 IDA DNA duplex unwinding
GO:0043140 IDA ATP-dependent 3'-5' DNA helicase activity
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078863 ASCC3 Activating signal cointegrator 1 complex subunit 3 protein_coding Danio_rerio
ENSDARG00000090561 ASCC3 (2 of 2) activating signal cointegrator 1 complex subunit 3 protein_coding Danio_rerio
ENSMUSG00000038774 Ascc3 activating signal cointegrator 1 complex subunit 3 protein_coding Mus_musculus

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