C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0008V6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs292 VISTA 9606 6:100225935-100826717
GeneTranscriptPositionBiotype
ENSG00000112246 (SIM1)
single-minded family bHLH transcription factor 1
ENST00000262901 (SIM1-201) 100388872-100463677 protein_coding
ENST00000369208 (SIM1-001) 100385015-100464929 protein_coding
ENST00000505753 (SIM1-003) 100391083-100394042 retained_intron
ENST00000511871 (SIM1-002) 100462603-100464889 retained_intron
ENSG00000112249 (ASCC3)
activating signal cointegrator 1 complex subunit 3
ENST00000324696 (ASCC3-003) 100647288-100881372 nonsense_mediated_decay
ENST00000324723 (ASCC3-006) 100848420-100881348 protein_coding
ENST00000369143 (ASCC3-002) 100856303-100881311 protein_coding
ENST00000369162 (ASCC3-001) 100508194-100881364 protein_coding
ENST00000468245 (ASCC3-005) 100848004-100881301 retained_intron
ENST00000518006 (ASCC3-007) 100509218-100510308 retained_intron
ENST00000522650 (ASCC3-004) 100715130-100881364 protein_coding
ENSG00000220695 (RP1-121G13.3)
ENST00000406773 (RP1-121G13.3-001) 100530276-100531052 processed_pseudogene
ENSG00000228082 (RP1-121G13.2)
ENST00000411442 (RP1-121G13.2-001) 100427118-100437484 antisense
CIL_0008V6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs292 VISTA 10090 10:50533719-51134473
GeneTranscriptPositionBiotype
ENSMUSG00000019913 (Sim1)
single-minded homolog 1 (Drosophila)
ENSMUST00000020071 (Sim1-201) 50895651-50989152 protein_coding
ENSMUSG00000038774 (Ascc3)
activating signal cointegrator 1 complex subunit 3
ENSMUST00000035606 (Ascc3-201) 50592669-50851202 protein_coding
ENSMUSG00000084635 (Gm23883)
predicted gene, 23883
ENSMUST00000122686 (Gm23883-201) 50866075-50866364 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008V6_0001ENSG00000112246ENST00000262901ENST00000369208ENST00000505753ENST00000511871ENSG00000112249ENST00000324696ENST00000324723ENST00000369143ENST00000369162ENST00000468245ENST00000518006ENST00000522650ENSG00000220695ENST00000406773ENSG00000228082ENST00000411442CIL_0008V6_0002ENSMUSG00000019913ENSMUST00000020071ENSMUSG00000038774ENSMUST00000035606ENSMUSG00000084635ENSMUST00000122686
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008V6_0001ENSG00000112246ENST00000262901ENST00000369208ENST00000511871ENSG00000112249ENST00000324696ENST00000369143ENST00000369162ENST00000468245ENSG00000220695ENST00000406773ENSG00000228082ENST00000411442CIL_0008V6_0002ENSMUSG00000019913ENSMUST00000020071ENSMUSG00000038774ENSMUST00000035606ENSMUSG00000084635ENSMUST00000122686
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112246 ENST00000262901 N/A N/A N/A N/A N/A 0.003±0.00 N/A 0.050±0.00 N/A N/A 0.843±0.00 N/A 0.013±0.00 0.093±0.00
ENST00000369208 0.920±0.00 0.001±0.00 4.206±0.00 N/A 0.266±0.00 N/A 0.002±0.00 1.009±0.97 0.050±0.03 0.006±0.00 1.056±0.77 N/A 0.013±0.01 N/A
ENST00000505753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511871 N/A N/A 4.896±0.00 N/A N/A N/A N/A N/A N/A N/A 0.714±0.00 N/A N/A N/A
ENSG00000112249 ENST00000324696 N/A N/A N/A N/A N/A N/A N/A N/A 2.536±0.00 N/A N/A N/A N/A N/A
ENST00000324723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000369143 0.466±0.00 1.113±0.00 0.648±0.00 0.494±0.00 0.939±0.41 N/A N/A N/A 0.487±0.00 N/A N/A 0.974±0.37 1.899±0.00 2.600±0.00
ENST00000369162 2.133±0.00 0.503±0.00 0.331±0.00 1.455±0.00 1.357±0.50 2.725±0.00 1.018±0.34 2.059±1.49 3.742±0.00 2.477±2.03 0.714±0.00 1.589±0.77 3.617±2.11 3.733±2.47
ENST00000468245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.962±0.00 N/A N/A N/A
ENST00000518006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000220695 ENST00000406773 N/A N/A 0.056±0.00 N/A N/A N/A N/A 0.694±0.00 N/A N/A N/A 0.018±0.00 N/A 0.095±0.02
ENSG00000228082 ENST00000411442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.310±0.10
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019913 ENSMUST00000020071 0.006±0.00 N/A N/A 0.307±0.19 0.061±0.03 0.015±0.00 N/A 1.470±0.25 0.002±0.00 0.080±0.00 0.074±0.04 0.053±0.04 0.008±0.01 0.035±0.02
ENSMUSG00000038774 ENSMUST00000035606 3.876±1.27 2.720±0.60 3.761±0.34 2.579±0.73 2.345±0.93 2.853±0.67 1.180±0.38 1.809±0.63 3.022±1.11 3.453±0.93 1.390±0.11 4.471±1.19 5.815±0.52 3.616±0.86
ENSMUSG00000084635 ENSMUST00000122686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.228±0.00

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