C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lymphocyte antigen 86
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112799 LY86 9606 + 6:6588108-6654983 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000230568 LY86-002 6588669-6654631 protein_coding
  ENST00000379953 LY86-001 6588108-6654983 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000230568ENST00000379953
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000230568 0.796±0.00 N/A N/A N/A 1.052±0.11 0.920±0.00 N/A 4.268±0.00 N/A N/A N/A 0.579±0.00 6.153±0.00 N/A
ENST00000379953 1.346±0.00 21.594±0.00 0.351±0.00 2.295±1.00 1.099±0.00 0.369±0.29 0.504±0.31 1.585±0.00 1.128±0.37 5.412±2.25 0.301±0.00 1.578±1.70 8.807±1.11 1.330±1.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003S9 CIL_0003S9_0001 CGP 6:6144085-6654983
CIL_0003S8 CIL_0003S8_0001 CGP 6:6588108-7251980

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0005886 TAS plasma membrane
GO:0006915 TAS apoptotic process
GO:0006954 IEA inflammatory response
GO:0006959 TAS humoral immune response
GO:0008283 TAS cell proliferation
GO:0031666 IGI positive regulation of lipopolysaccharide-mediated signaling pathway
GO:0045087 IEA innate immune response

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090649 LY86 lymphocyte antigen 86 protein_coding Danio_rerio
ENSMUSG00000021423 Ly86 lymphocyte antigen 86 protein_coding Mus_musculus

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