C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003S9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124491-ENSG00000112799 CGP 9606 6:6144085-6654983
GeneTranscriptPositionBiotype
ENSG00000112799 (LY86)
lymphocyte antigen 86 		ENST00000230568 (LY86-002) 6588669-6654631 protein_coding
ENST00000379953 (LY86-001) 6588108-6654983 protein_coding
ENSG00000124491 (F13A1)
coagulation factor XIII, A1 polypeptide 		ENST00000264870 (F13A1-001) 6144085-6320834 protein_coding
ENST00000414279 (F13A1-003) 6266713-6321013 protein_coding
ENST00000431222 (F13A1-004) 6266734-6320905 protein_coding
ENST00000445223 (F13A1-002) 6206411-6224808 protein_coding
ENST00000451619 (F13A1-006) 6305113-6320642 protein_coding
ENST00000479211 (F13A1-005) 6250907-6305654 retained_intron
ENSG00000216863 (LY86-AS1)
LY86 antisense RNA 1 		ENST00000429345 (LY86-AS1-002) 6346465-6622744 antisense
ENST00000435641 (LY86-AS1-001) 6360591-6622695 antisense
ENST00000447858 (LY86-AS1-003) 6366132-6587193 antisense
ENST00000606044 (LY86-AS1-005) 6620964-6622697 antisense
ENST00000606992 (LY86-AS1-006) 6475306-6492984 antisense
ENST00000607278 (LY86-AS1-004) 6620847-6622771 antisense
ENSG00000218868 (CNN3P1)
calponin 3, acidic pseudogene 1 		ENST00000401596 (CNN3P1-001) 6534697-6535631 processed_pseudogene
ENSG00000241216 (SNAPC5P1)
small nuclear RNA activating complex, polypeptide 5, 19kDa pseudogene 1 		ENST00000403621 (SNAPC5P1-001) 6347081-6347381 transcribed_processed_pseudogene
ENSG00000263572 (MIR7853)
microRNA 5683 		ENST00000584820 (MIR7853-201) 6169304-6169435 miRNA
CIL_0003S9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039109-ENSMUSG00000021423 CGP 10090 13:36867178-37419036
GeneTranscriptPositionBiotype
ENSMUSG00000021423 (Ly86)
lymphocyte antigen 86 		ENSMUST00000021860 (Ly86-201) 37345345-37419036 protein_coding
ENSMUSG00000039109 (F13a1)
coagulation factor XIII, A1 subunit 		ENSMUST00000037491 (F13a1-201) 36867178-37049213 protein_coding
ENSMUST00000164727 (F13a1-202) 36867178-37050244 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003S9_0001ENSG00000112799ENST00000230568ENST00000379953ENSG00000124491ENST00000264870ENST00000414279ENST00000431222ENST00000445223ENST00000451619ENST00000479211ENSG00000216863ENST00000429345ENST00000435641ENST00000447858ENST00000606044ENST00000606992ENST00000607278ENSG00000218868ENST00000401596ENSG00000241216ENST00000403621ENSG00000263572ENST00000584820CIL_0003S9_0002ENSMUSG00000021423ENSMUST00000021860ENSMUSG00000039109ENSMUST00000037491ENSMUST00000164727
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003S9_0001ENSG00000112799ENST00000230568ENST00000379953ENSG00000124491ENST00000264870ENST00000414279ENSG00000216863ENST00000429345ENST00000435641ENST00000447858ENST00000606044ENST00000606992ENST00000607278ENSG00000218868ENST00000401596ENSG00000241216ENST00000403621ENSG00000263572ENST00000584820CIL_0003S9_0002ENSMUSG00000021423ENSMUST00000021860ENSMUSG00000039109ENSMUST00000037491ENSMUST00000164727
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112799 ENST00000230568 0.796±0.00 N/A N/A N/A 1.052±0.11 0.920±0.00 N/A 4.268±0.00 N/A N/A N/A 0.579±0.00 6.153±0.00 N/A
ENST00000379953 1.346±0.00 21.594±0.00 0.351±0.00 2.295±1.00 1.099±0.00 0.369±0.29 0.504±0.31 1.585±0.00 1.128±0.37 5.412±2.25 0.301±0.00 1.578±1.70 8.807±1.11 1.330±1.22
ENSG00000124491 ENST00000264870 N/A N/A N/A N/A 3.437±0.00 1.561±0.00 1.533±0.00 0.059±0.00 3.913±0.00 N/A N/A N/A N/A 0.313±0.00
ENST00000414279 N/A N/A N/A N/A N/A N/A N/A 0.416±0.00 N/A N/A 1.861±0.00 N/A N/A N/A
ENST00000431222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000216863 ENST00000429345 0.030±0.00 0.113±0.00 0.044±0.00 1.742±0.00 0.032±0.00 N/A N/A 0.132±0.00 0.005±0.00 N/A N/A N/A N/A 0.095±0.00
ENST00000435641 N/A 0.104±0.00 N/A N/A 0.018±0.00 N/A 0.008±0.00 0.024±0.00 N/A N/A N/A 0.056±0.00 0.027±0.00 0.091±0.00
ENST00000447858 N/A N/A 0.458±0.00 0.711±0.00 N/A N/A 0.062±0.00 N/A N/A 0.109±0.01 N/A N/A 0.081±0.01 N/A
ENST00000606044 N/A N/A N/A N/A 0.411±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606992 0.124±0.00 0.331±0.00 N/A 0.081±0.00 N/A 0.117±0.00 0.024±0.00 0.051±0.00 0.045±0.00 0.164±0.00 N/A N/A 0.107±0.00 0.370±0.00
ENST00000607278 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.00 N/A N/A N/A N/A
ENSG00000218868 ENST00000401596 0.014±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00
ENSG00000241216 ENST00000403621 N/A N/A N/A N/A 0.218±0.00 N/A N/A 0.582±0.00 N/A 0.277±0.00 N/A N/A N/A N/A
ENSG00000263572 ENST00000584820 N/A N/A N/A N/A 10.965±0.00 26.469±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021423 ENSMUST00000021860 8.358±2.46 2.529±0.41 10.949±1.40 3.039±0.89 20.157±1.30 3.391±0.68 1.643±0.58 3.540±1.08 6.725±4.83 4.913±1.34 0.973±0.80 5.183±2.00 1.853±1.46 0.329±0.18
ENSMUSG00000039109 ENSMUST00000037491 15.921±2.32 1.330±0.20 13.487±0.89 0.873±0.48 21.926±2.32 3.265±0.68 4.701±0.46 0.829±0.15 3.517±2.15 4.422±0.56 1.540±0.50 2.547±0.50 3.454±3.41 0.696±0.25
ENSMUST00000164727 N/A N/A N/A N/A N/A 0.633±0.00 N/A 0.724±0.00 0.019±0.01 N/A 1.191±0.58 N/A 0.775±0.00 0.151±0.00

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