C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heat shock 70kDa protein 9 (mortalin)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113013 HSPA9 9606 - 5:138554882-138575444 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000297185 HSPA9-001 138554882-138575444 protein_coding
  ENST00000501917 HSPA9-012 138555360-138566718 processed_transcript
  ENST00000504810 HSPA9-010 138568968-138575166 protein_coding
  ENST00000504902 HSPA9-008 138567001-138575340 nonsense_mediated_decay
  ENST00000505110 HSPA9-004 138568966-138575401 nonsense_mediated_decay
  ENST00000506477 HSPA9-005 138570799-138575411 retained_intron
  ENST00000507097 HSPA9-002 138557342-138575401 retained_intron
  ENST00000507115 HSPA9-003 138568925-138575403 nonsense_mediated_decay
  ENST00000507886 HSPA9-011 138570977-138575009 protein_coding
  ENST00000508003 HSPA9-006 138559720-138561789 retained_intron
  ENST00000512328 HSPA9-007 138556047-138558631 nonsense_mediated_decay
  ENST00000523929 HSPA9-013 138558553-138566711 nonsense_mediated_decay
  ENST00000524109 HSPA9-014 138555827-138557891 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000297185ENST00000507097ENST00000507115ENST00000512328ENST00000524109
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000297185 28.670±0.00 44.458±0.00 8.950±0.00 35.196±15.98 8.931±0.20 5.809±0.51 37.619±26.23 8.708±1.33 13.382±0.00 21.856±12.54 46.161±24.89 23.256±22.46 7.619±0.42 15.312±0.00
ENST00000507097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.846±0.00 N/A N/A N/A
ENST00000507115 N/A N/A N/A N/A 21.708±0.00 30.309±0.00 N/A 43.399±0.00 N/A N/A 40.841±0.00 N/A N/A N/A
ENST00000512328 38.249±0.00 N/A N/A 73.813±0.00 N/A 31.727±0.00 N/A N/A N/A N/A N/A 39.850±0.00 53.619±0.00 47.825±0.25
ENST00000524109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.662±0.00 23.014±0.00 25.038±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005DB CIL_0005DB_0001 CGP 5:138506095-138575444
CIL_0005DA CIL_0005DA_0001 CGP 5:138554882-138935034

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000902 IEA cell morphogenesis
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 TAS cytoplasm
GO:0005739 IDA mitochondrion
GO:0005925 IDA focal adhesion
GO:0005975 IEA carbohydrate metabolic process
GO:0006457 IEA protein folding
GO:0006611 IEA protein export from nucleus
GO:0006626 TAS protein targeting to mitochondrion
GO:0016773 IEA phosphotransferase activity, alcohol group as acceptor
GO:0019899 IEA enzyme binding
GO:0042645 IDA mitochondrial nucleoid
GO:0043066 TAS negative regulation of apoptotic process
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0051082 TAS:IEA unfolded protein binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003035 hspa9 heat shock protein 9 protein_coding Danio_rerio
ENSMUSG00000024359 Hspa9 heat shock protein 9 protein_coding Mus_musculus

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