C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | amyloid beta (A4) precursor protein-binding, family B, member 3 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000113108  |
APBB3 | 9606 | - |
5:140558268-140593752  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000354402 |
APBB3-002 | 140558272-140564260 | protein_coding | ||
| ENST00000356738 |
APBB3-001 | 140558272-140564260 | protein_coding | ||
| ENST00000357560 |
APBB3-003 | 140558272-140564689 | protein_coding | ||
| ENST00000358580 |
APBB3-201 | 140558269-140564604 | protein_coding | ||
| ENST00000412920 |
APBB3-011 | 140558585-140564245 | protein_coding | ||
| ENST00000467078 |
APBB3-004 | 140558272-140564245 | nonsense_mediated_decay | ||
| ENST00000503850 |
APBB3-008 | 140563338-140564389 | retained_intron | ||
| ENST00000503979 |
APBB3-021 | 140561843-140562842 | retained_intron | ||
| ENST00000504872 |
APBB3-023 | 140560699-140562149 | retained_intron | ||
| ENST00000505617 |
APBB3-019 | 140562173-140564781 | processed_transcript | ||
| ENST00000506165 |
APBB3-014 | 140563534-140564374 | retained_intron | ||
| ENST00000506289 |
APBB3-018 | 140560719-140564701 | retained_intron | ||
| ENST00000506958 |
APBB3-017 | 140562369-140564469 | retained_intron | ||
| ENST00000507279 |
APBB3-024 | 140562443-140592123 | processed_transcript | ||
| ENST00000509914 |
APBB3-005 | 140558269-140564332 | nonsense_mediated_decay | ||
| ENST00000510241 |
APBB3-006 | 140558269-140564596 | retained_intron | ||
| ENST00000510304 |
APBB3-025 | 140576948-140593752 | processed_transcript | ||
| ENST00000511201 |
APBB3-012 | 140560401-140564245 | protein_coding | ||
| ENST00000511459 |
APBB3-020 | 140563406-140564749 | retained_intron | ||
| ENST00000511463 |
APBB3-022 | 140561643-140562507 | retained_intron | ||
| ENST00000511896 |
APBB3-007 | 140558394-140564371 | nonsense_mediated_decay | ||
| ENST00000513507 |
APBB3-015 | 140562032-140564274 | retained_intron | ||
| ENST00000513766 |
APBB3-016 | 140563890-140574197 | processed_transcript | ||
| ENST00000515056 |
APBB3-009 | 140558268-140562907 | retained_intron | ||
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006ZN | CIL_0006ZN_0001 | CGP | 5:140547666-140593752 |
| CIL_0006ZI | CIL_0006ZI_0001 | CGP | 5:140558268-140593752 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005634 | IEA | nucleus |
| GO:0005737 | IDA | cytoplasm |
| GO:0015629 | IDA | actin cytoskeleton |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000053771
|
APBB3 | amyloid beta (A4) precursor protein-binding, family B, member 3 | protein_coding | Danio_rerio | |
|
ENSMUSG00000006050
|
Sra1 | steroid receptor RNA activator 1 | protein_coding | Mus_musculus | |
