C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006ZN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000243056-ENSG00000113108 CGP 9606 5:140547666-140593752
GeneTranscriptPositionBiotype
ENSG00000243056 (EIF4EBP3)
eukaryotic translation initiation factor 4E binding protein 3 		ENST00000310331 (EIF4EBP3-001) 140547666-140549578 protein_coding
ENSG00000251453 (HAUS1P1)
HAUS augmin-like complex, subunit 1 pseudogene 1 		ENST00000505275 (HAUS1P1-001) 140581504-140582335 processed_pseudogene
CIL_0006ZN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000090264-ENSMUSG00000006050 CGP 10090 18:36664060-36679366
GeneTranscriptPositionBiotype
ENSMUSG00000006050 (Sra1)
steroid receptor RNA activator 1 		ENSMUST00000001415 (Sra1-201) 36671160-36679366 protein_coding
ENSMUST00000006209 (Sra1-005) 36667429-36670285 protein_coding
ENSMUST00000173202 (Sra1-004) 36667272-36670306 retained_intron
ENSMUST00000173482 (Sra1-002) 36667246-36670286 nonsense_mediated_decay
ENSMUST00000173875 (Sra1-001) 36666681-36671196 protein_coding
ENSMUST00000174125 (Sra1-003) 36669822-36670276 retained_intron
ENSMUSG00000033272 (Slc35a4)
solute carrier family 35, member A4 		ENSMUST00000036158 (Slc35a4-001) 36679592-36683858 protein_coding
ENSMUST00000050476 (Slc35a4-002) 36679579-36683853 protein_coding
ENSMUST00000168343 (Slc35a4-004) 36679592-36680959 processed_transcript
ENSMUST00000170288 (Slc35a4-003) 36679583-36681702 processed_transcript
ENSMUST00000185899 (Slc35a4-005) 36679609-36681725 protein_coding
ENSMUST00000186538 (Slc35a4-201) 36679215-36683861 protein_coding
ENSMUSG00000090264 (Eif4ebp3)
eukaryotic translation initiation factor 4E binding protein 3 		ENSMUST00000036765 (Eif4ebp3-001) 36664060-36665917 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ZN_0001ENSG00000243056ENST00000310331ENSG00000251453ENST00000505275CIL_0006ZN_0002ENSMUSG00000006050ENSMUST00000001415ENSMUST00000006209ENSMUST00000173202ENSMUST00000173482ENSMUST00000173875ENSMUST00000174125ENSMUSG00000033272ENSMUST00000036158ENSMUST00000050476ENSMUST00000168343ENSMUST00000170288ENSMUST00000185899ENSMUST00000186538ENSMUSG00000090264ENSMUST00000036765
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006ZN_0001ENSG00000243056ENST00000310331ENSG00000251453ENST00000505275CIL_0006ZN_0002ENSMUSG00000006050ENSMUST00000001415ENSMUST00000006209ENSMUST00000173482ENSMUSG00000033272ENSMUST00000036158ENSMUST00000050476ENSMUST00000186538ENSMUSG00000090264ENSMUST00000036765
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000243056 ENST00000310331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 143.003±0.00 N/A N/A N/A
ENSG00000251453 ENST00000505275 0.013±0.00 N/A N/A N/A N/A 0.177±0.00 0.026±0.00 0.013±0.00 N/A 0.105±0.00 N/A 0.036±0.01 0.041±0.01 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006050 ENSMUST00000001415 22.652±0.17 N/A 23.649±3.81 19.449±4.26 23.163±0.00 N/A N/A N/A 8.067±1.77 N/A 9.228±1.23 12.479±0.42 6.486±0.00 8.100±1.50
ENSMUST00000006209 N/A N/A N/A 33.239±0.00 N/A N/A N/A N/A 30.467±5.69 N/A N/A 69.090±0.00 53.086±12.18 25.749±7.29
ENSMUST00000173202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173482 N/A N/A N/A 40.449±0.00 N/A N/A N/A N/A 19.773±0.66 N/A 27.524±3.62 64.001±13.89 67.697±29.32 52.648±0.00
ENSMUST00000173875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033272 ENSMUST00000036158 47.511±3.95 88.696±2.36 26.366±0.61 14.681±7.28 65.139±7.90 71.574±12.76 20.263±1.06 40.502±4.15 20.083±14.26 52.937±3.42 11.107±0.42 76.892±35.71 22.274±8.81 4.012±0.13
ENSMUST00000050476 30.294±6.21 37.310±3.25 18.746±1.02 16.570±2.48 30.080±3.47 39.047±5.56 19.379±2.29 29.296±3.34 13.718±9.07 23.826±4.45 13.825±1.59 28.846±10.66 12.066±3.06 4.097±0.84
ENSMUST00000168343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186538 N/A N/A N/A 7.819±0.00 N/A N/A N/A N/A 3.840±0.00 N/A N/A N/A N/A 4.218±0.97
ENSMUSG00000090264 ENSMUST00000036765 N/A 10.463±0.17 N/A N/A N/A 196.729±32.63 N/A N/A 20.750±13.31 N/A N/A N/A N/A N/A

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