C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: contactin 3 (plasmacytoma associated)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113805 CNTN3 9606 - 3:74262568-74521140 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263665 CNTN3-001 74262568-74521140 protein_coding
  ENST00000477856 CNTN3-002 74264385-74267539 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263665ENST00000477856
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263665 0.289±0.00 0.293±0.00 1.034±0.00 1.276±0.19 0.242±0.18 0.229±0.00 0.084±0.07 0.636±0.29 0.353±0.25 0.365±0.18 0.009±0.00 0.215±0.12 0.012±0.00 0.344±0.08
ENST00000477856 N/A N/A 1.862±0.00 N/A N/A N/A N/A 1.746±0.00 N/A N/A N/A N/A 0.043±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LH CIL_0008LH_0001 VISTA 3:73779601-74381867

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007155 IEA cell adhesion
GO:0007399 IEA nervous system development
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000030075 Cntn3 contactin 3 protein_coding Mus_musculus

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