C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: contactin 3 (plasmacytoma associated)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263665 CNTN3-001 ENSG00000113805 9606 - 3:74262568-74521140 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263665
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263665 0.289±0.00 0.293±0.00 1.034±0.00 1.276±0.19 0.242±0.18 0.229±0.00 0.084±0.07 0.636±0.29 0.353±0.25 0.365±0.18 0.009±0.00 0.215±0.12 0.012±0.00 0.344±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LH CIL_0008LH_0001 VISTA 3:73779601-74381867

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007155 IEA cell adhesion
GO:0007399 IEA nervous system development
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032159 Cntn3-201 protein_coding Mus_musculus 0 3984

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