C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0008LH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1732 VISTA 9606 3:73779601-74381867
GeneTranscriptPositionBiotype
ENSG00000113805 (CNTN3)
contactin 3 (plasmacytoma associated)
ENST00000263665 (CNTN3-001) 74262568-74521140 protein_coding
ENST00000477856 (CNTN3-002) 74264385-74267539 processed_transcript
ENSG00000213452 (AKR1B1P2)
aldo-keto reductase family 1, member B1 pseudogene 2
ENST00000494640 (AKR1B1P2-001) 74135959-74136892 processed_pseudogene
ENSG00000223738 (RP11-781E19.1)
ENST00000468766 (RP11-781E19.1-001) 74101349-74103553 processed_pseudogene
ENSG00000239454 (RP11-508O18.1)
ENST00000494761 (RP11-508O18.1-001) 73999805-74005609 lincRNA
ENSG00000242741 (RP11-20B7.1)
ENST00000498832 (RP11-20B7.1-001) 73808601-73902866 lincRNA
ENSG00000278554 (Metazoa_SRP)
Metazoan signal recognition particle RNA
ENST00000616260 (Metazoa_SRP.1-478) 73959642-73959927 misc_RNA
CIL_0008LH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1732 VISTA 10090 6:101636781-102239346
GeneTranscriptPositionBiotype
ENSMUSG00000030075 (Cntn3)
contactin 3
ENSMUST00000032159 (Cntn3-201) 102163306-102464667 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008LH_0001ENSG00000113805ENST00000263665ENST00000477856ENSG00000213452ENST00000494640ENSG00000223738ENST00000468766ENSG00000239454ENST00000494761ENSG00000242741ENST00000498832ENSG00000278554ENST00000616260CIL_0008LH_0002ENSMUSG00000030075ENSMUST00000032159
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008LH_0001ENSG00000113805ENST00000263665ENST00000477856ENSG00000213452ENST00000494640ENSG00000223738ENST00000468766ENSG00000239454ENST00000494761ENSG00000242741ENST00000498832ENSG00000278554ENST00000616260CIL_0008LH_0002ENSMUSG00000030075ENSMUST00000032159
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113805 ENST00000263665 0.289±0.00 0.293±0.00 1.034±0.00 1.276±0.19 0.242±0.18 0.229±0.00 0.084±0.07 0.636±0.29 0.353±0.25 0.365±0.18 0.009±0.00 0.215±0.12 0.012±0.00 0.344±0.08
ENST00000477856 N/A N/A 1.862±0.00 N/A N/A N/A N/A 1.746±0.00 N/A N/A N/A N/A 0.043±0.00 N/A
ENSG00000213452 ENST00000494640 N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A 0.021±0.00 N/A 0.049±0.00
ENSG00000223738 ENST00000468766 N/A N/A N/A 0.006±0.00 N/A 0.021±0.02 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239454 ENST00000494761 N/A N/A N/A N/A N/A N/A 0.007±0.00 N/A 0.067±0.00 N/A N/A N/A N/A 0.029±0.00
ENSG00000242741 ENST00000498832 0.128±0.00 N/A N/A 0.171±0.00 0.065±0.00 N/A 0.044±0.00 N/A 0.219±0.00 N/A N/A 0.029±0.01 N/A N/A
ENSG00000278554 ENST00000616260 0.302±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030075 ENSMUST00000032159 N/A 0.038±0.00 0.067±0.03 1.913±1.54 N/A 0.105±0.05 0.020±0.01 0.030±0.01 0.399±0.18 N/A 0.004±0.00 0.173±0.17 0.040±0.02 0.142±0.04

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