C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBCC domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113838 TBCCD1 9606 - 3:186546073-186570543 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338733 TBCCD1-001 186546339-186567352 protein_coding
  ENST00000413695 TBCCD1-003 186556590-186570543 protein_coding
  ENST00000424280 TBCCD1-201 186546073-186570543 protein_coding
  ENST00000430560 TBCCD1-004 186558417-186564345 protein_coding
  ENST00000446782 TBCCD1-002 186546341-186570318 protein_coding
  ENST00000479590 TBCCD1-005 186553343-186554475 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338733ENST00000446782
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338733 2.294±0.00 3.150±0.26 3.135±0.00 2.296±0.00 N/A 2.718±0.00 1.817±0.00 1.722±1.08 4.575±0.00 3.072±0.00 10.393±0.00
ENST00000446782 2.234±0.00 N/A N/A 0.555±0.00 3.332±0.00 N/A 2.681±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RN CIL_0006RN_0001 CGP 3:186105668-186546702
CIL_0008PR CIL_0008PR_0001 VISTA 3:186106052-186707543
CIL_0003YB CIL_0003YB_0002 CGP 3:186538441-186570543
CIL_0006RP CIL_0006RP_0001 CGP 3:186546073-186597203

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000902 IEA cell morphogenesis
GO:0003779 IEA actin binding
GO:0005737 IEA cytoplasm
GO:0007010 IEA cytoskeleton organization
GO:0008360 IMP regulation of cell shape
GO:0030334 IMP regulation of cell migration
GO:0031616 IDA spindle pole centrosome
GO:0051661 IMP maintenance of centrosome location
GO:0051684 IMP maintenance of Golgi location

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056886 tbccd1 TBCC domain containing 1 protein_coding Danio_rerio
ENSMUSG00000004462 Tbccd1 TBCC domain containing 1 protein_coding Mus_musculus

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