C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: propionyl CoA carboxylase, beta polypeptide
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000114054 PCCB 9606 + 3:136250306-136337896 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000251654 PCCB-001 136250306-136330169 protein_coding
  ENST00000459873 PCCB-019 136255318-136283943 protein_coding
  ENST00000462542 PCCB-017 136251243-136283914 protein_coding
  ENST00000462637 PCCB-010 136250355-136330169 protein_coding
  ENST00000465176 PCCB-020 136255857-136283901 processed_transcript
  ENST00000465423 PCCB-014 136250369-136262010 protein_coding
  ENST00000466072 PCCB-011 136250355-136330169 protein_coding
  ENST00000468777 PCCB-009 136250355-136330169 protein_coding
  ENST00000469217 PCCB-003 136250359-136330170 protein_coding
  ENST00000471595 PCCB-002 136250358-136337895 protein_coding
  ENST00000473073 PCCB-005 136260150-136330169 retained_intron
  ENST00000474833 PCCB-016 136250391-136327731 processed_transcript
  ENST00000475214 PCCB-004 136255321-136327093 retained_intron
  ENST00000478469 PCCB-006 136250375-136337896 protein_coding
  ENST00000482086 PCCB-013 136250355-136330169 protein_coding
  ENST00000483687 PCCB-008 136250355-136330169 protein_coding
  ENST00000484181 PCCB-012 136250355-136330169 nonsense_mediated_decay
  ENST00000490504 PCCB-007 136250355-136330169 protein_coding
  ENST00000494742 PCCB-018 136255307-136262025 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251654ENST00000462542ENST00000482086ENST00000484181ENST00000490504
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251654 N/A N/A 4.605±0.00 9.061±1.65 N/A 15.183±7.81 16.781±0.93 18.575±0.00 3.752±0.00 9.308±0.00 13.415±0.00 15.088±4.99 15.139±1.77
ENST00000462542 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.898±0.00 17.806±0.00 N/A N/A
ENST00000482086 11.161±0.00 9.867±0.00 N/A 17.547±0.00 19.268±0.00 N/A 19.018±0.00 15.736±0.00 4.943±0.00 N/A N/A N/A 13.084±0.00
ENST00000484181 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.138±0.00 7.739±0.00 14.023±0.00 N/A
ENST00000490504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.684±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003989 IEA acetyl-CoA carboxylase activity
GO:0004658 IEA propionyl-CoA carboxylase activity
GO:0005524 IEA ATP binding
GO:0005739 TAS mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0005829 TAS cytosol
GO:0006633 IEA fatty acid biosynthetic process
GO:0006635 TAS fatty acid beta-oxidation
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0006768 TAS biotin metabolic process
GO:0008152 IEA metabolic process
GO:0009317 IEA acetyl-CoA carboxylase complex
GO:0016874 IEA ligase activity
GO:0019626 TAS short-chain fatty acid catabolic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038910 pccb propionyl Coenzyme A carboxylase, beta polypeptide protein_coding Danio_rerio
ENSMUSG00000032527 Pccb propionyl Coenzyme A carboxylase, beta polypeptide protein_coding Mus_musculus

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