C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: propionyl CoA carboxylase, beta polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000251654 PCCB-001 ENSG00000114054 9606 + 3:136250306-136330169 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251654
Transcript ID Bladder Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251654 4.605±0.00 9.061±1.65 15.183±7.81 16.781±0.93 18.575±0.00 3.752±0.00 9.308±0.00 13.415±0.00 15.088±4.99 15.139±1.77

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003989 IEA acetyl-CoA carboxylase activity
GO:0004658 IEA propionyl-CoA carboxylase activity
GO:0005524 IEA ATP binding
GO:0005739 TAS mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0005829 TAS cytosol
GO:0006633 IEA fatty acid biosynthetic process
GO:0006635 TAS fatty acid beta-oxidation
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0006768 TAS biotin metabolic process
GO:0008152 IEA metabolic process
GO:0009317 IEA acetyl-CoA carboxylase complex
GO:0016874 IEA ligase activity
GO:0019626 TAS short-chain fatty acid catabolic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035116 Pccb-001 protein_coding Mus_musculus 0 1877
ENSMUST00000149322 Pccb-002 protein_coding Mus_musculus 0 1118
ENSMUST00000145091 Pccb-004 processed_transcript Mus_musculus 0 756
ENSMUST00000142676 Pccb-003 protein_coding Mus_musculus 0 743
ENSMUST00000189498 Pccb-006 protein_coding Mus_musculus 0 279
ENSMUST00000149998 Pccb-005 retained_intron Mus_musculus 0 244

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