C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: propionyl Coenzyme A carboxylase, beta polypeptide
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032527 Pccb 10090 - 9:100982032-101034898 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035116 Pccb-001 100982032-101034898 protein_coding
  ENSMUST00000142676 Pccb-003 100995562-101034867 protein_coding
  ENSMUST00000145091 Pccb-004 101011973-101034850 processed_transcript
  ENSMUST00000149322 Pccb-002 100982032-101034877 protein_coding
  ENSMUST00000149998 Pccb-005 100984373-100985609 retained_intron
  ENSMUST00000189498 Pccb-006 101023219-101034881 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035116ENSMUST00000142676ENSMUST00000145091ENSMUST00000149322
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035116 91.306±23.06 98.071±9.40 25.638±3.07 15.961±5.72 78.334±9.68 80.863±1.77 54.982±2.16 169.617±16.54 63.028±42.87 34.492±1.42 34.770±1.16 41.356±12.86 12.339±7.81 5.152±0.18
ENSMUST00000142676 N/A 40.611±3.31 N/A N/A 52.886±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.458±0.00
ENSMUST00000149322 N/A N/A N/A 8.271±0.00 N/A N/A N/A N/A N/A N/A N/A 14.467±0.00 5.306±0.34 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WP CIL_0000WP_0002 CGP 9:100597798-101034898
CIL_00019E CIL_00019E_0002 CGP 9:100982032-101104800

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003989 IEA acetyl-CoA carboxylase activity
GO:0004658 ISS propionyl-CoA carboxylase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006633 IEA fatty acid biosynthetic process
GO:0008152 IEA metabolic process
GO:0009317 IEA acetyl-CoA carboxylase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038910 pccb propionyl Coenzyme A carboxylase, beta polypeptide protein_coding Danio_rerio
ENSG00000114054 PCCB propionyl CoA carboxylase, beta polypeptide protein_coding Homo_sapiens

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