C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription factor Dp-2 (E2F dimerization partner 2)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000114126 TFDP2 9606 - 3:141951147-142149544 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000464782 TFDP2-010 141978537-142149537 processed_transcript
  ENST00000467072 TFDP2-004 141952481-142149532 protein_coding
  ENST00000467634 TFDP2-013 141995071-142126370 protein_coding
  ENST00000467667 TFDP2-018 141959800-142028597 protein_coding
  ENST00000471095 TFDP2-017 141994270-142028606 retained_intron
  ENST00000474279 TFDP2-024 141952829-141963835 protein_coding
  ENST00000475734 TFDP2-012 141993573-142149521 protein_coding
  ENST00000476617 TFDP2-014 142000325-142149470 processed_transcript
  ENST00000477292 TFDP2-008 141952143-142028626 protein_coding
  ENST00000478006 TFDP2-020 141963820-142028631 protein_coding
  ENST00000479040 TFDP2-002 141952496-142005469 protein_coding
  ENST00000486111 TFDP2-007 141951502-142028665 protein_coding
  ENST00000487734 TFDP2-006 141952496-142101757 nonsense_mediated_decay
  ENST00000488107 TFDP2-016 141978588-142090838 protein_coding
  ENST00000489671 TFDP2-001 141951147-142149521 protein_coding
  ENST00000491667 TFDP2-009 142093031-142149544 retained_intron
  ENST00000492919 TFDP2-019 141974067-141995229 retained_intron
  ENST00000493204 TFDP2-022 141974105-141978688 retained_intron
  ENST00000494358 TFDP2-003 141995063-142149470 protein_coding
  ENST00000494656 TFDP2-021 141989067-141993585 protein_coding
  ENST00000495095 TFDP2-011 141995096-142149537 processed_transcript
  ENST00000495310 TFDP2-005 141952276-142028646 protein_coding
  ENST00000497579 TFDP2-015 141963852-142029157 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000467072ENST00000476617ENST00000478006ENST00000479040ENST00000486111ENST00000488107ENST00000489671ENST00000495310
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000467072 N/A 2.856±0.00 N/A 2.413±0.00 N/A 3.760±0.00 4.359±0.00 N/A N/A N/A N/A
ENST00000476617 N/A 11.764±0.00 N/A N/A N/A N/A N/A 8.796±0.00 34.396±0.00 N/A N/A
ENST00000478006 N/A N/A N/A N/A N/A N/A N/A N/A 5.165±0.00 10.020±0.00 13.981±0.00
ENST00000479040 N/A N/A N/A N/A 6.762±2.77 5.393±0.00 3.271±0.00 3.959±0.00 5.410±0.00 11.313±2.62 29.420±1.45
ENST00000486111 N/A N/A 3.213±0.00 N/A N/A N/A N/A 1.681±0.00 N/A 4.345±0.92 N/A
ENST00000488107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.158±0.00
ENST00000489671 1.747±0.00 1.063±0.00 N/A 1.180±0.00 0.975±0.00 N/A 2.257±0.00 1.370±0.00 N/A N/A N/A
ENST00000495310 N/A N/A N/A N/A 2.269±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I1 CIL_0008I1_0001 VISTA 3:141560621-142161968
CIL_00052D CIL_00052D_0002 CGP 3:141876124-142000353

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 IEA:TAS mitotic cell cycle
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003712 IEA transcription cofactor activity
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005667 IEA transcription factor complex
GO:0006351 IEA:TAS transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0007049 IEA cell cycle
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0007219 TAS Notch signaling pathway
GO:0008134 IEA:IPI transcription factor binding
GO:0010467 TAS gene expression
GO:0019904 IPI protein domain specific binding
GO:0045944 TAS positive regulation of transcription from RNA polymerase II promoter
GO:2001141 IEA regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042835 tfdp2 transcription factor Dp-2 protein_coding Danio_rerio
ENSMUSG00000032411 Tfdp2 transcription factor Dp 2 protein_coding Mus_musculus

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