C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription factor Dp 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032411 Tfdp2 10090 + 9:96196275-96323646 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034982 Tfdp2-002 96196304-96323646 protein_coding
  ENSMUST00000165120 Tfdp2-001 96196275-96318878 protein_coding
  ENSMUST00000165768 Tfdp2-006 96259285-96318905 protein_coding
  ENSMUST00000179065 Tfdp2-005 96259253-96318981 protein_coding
  ENSMUST00000179416 Tfdp2-003 96258742-96319084 protein_coding
  ENSMUST00000185644 Tfdp2-008 96196348-96318981 protein_coding
  ENSMUST00000186609 Tfdp2-009 96258705-96310582 protein_coding
  ENSMUST00000188008 Tfdp2-007 96196317-96317964 protein_coding
  ENSMUST00000188750 Tfdp2-013 96196337-96317971 protein_coding
  ENSMUST00000188829 Tfdp2-015 96202156-96295128 protein_coding
  ENSMUST00000189606 Tfdp2-012 96258759-96317967 protein_coding
  ENSMUST00000190104 Tfdp2-011 96258742-96287716 protein_coding
  ENSMUST00000190689 Tfdp2-017 96305101-96308248 retained_intron
  ENSMUST00000190709 Tfdp2-014 96196380-96247087 processed_transcript
  ENSMUST00000191133 Tfdp2-010 96310566-96317903 protein_coding
  ENSMUST00000191390 Tfdp2-016 96288357-96291507 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034982ENSMUST00000165120ENSMUST00000165768ENSMUST00000179065ENSMUST00000188008ENSMUST00000188750ENSMUST00000190709
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034982 0.498±0.00 15.538±1.00 6.837±0.00 3.079±1.77 2.933±1.37 5.424±1.79 3.360±0.00 6.349±0.33 5.141±8.17 7.652±3.58 1.270±0.42 9.500±0.81 1.744±1.06 0.380±0.16
ENSMUST00000165120 N/A N/A N/A N/A 10.073±0.00 10.265±2.18 N/A 7.778±0.00 3.545±1.34 N/A N/A 19.131±10.31 N/A 2.039±0.90
ENSMUST00000165768 N/A N/A N/A 3.482±0.00 N/A N/A N/A N/A N/A N/A N/A 9.294±0.00 3.123±1.33 2.059±0.00
ENSMUST00000179065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.003±0.00 N/A
ENSMUST00000188008 N/A 132.191±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.477±1.34 N/A
ENSMUST00000190709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.334±5.09 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I1 CIL_0008I1_0002 VISTA 9:96080125-96682941

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 IEA mitotic cell cycle
GO:0003677 IEA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0003712 IEA transcription cofactor activity
GO:0005635 TAS nuclear envelope
GO:0005667 IC transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0007507 IEA heart development
GO:0008134 IEA transcription factor binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042835 tfdp2 transcription factor Dp-2 protein_coding Danio_rerio
ENSG00000114126 TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) protein_coding Homo_sapiens
ENSG00000269905 TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) protein_coding Homo_sapiens

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