C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000114349 GNAT1 9606 + 3:50191612-50196516 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000232461 GNAT1-001 50191612-50196516 protein_coding
  ENST00000433068 GNAT1-002 50191670-50196515 protein_coding
  ENST00000440836 GNAT1-003 50192672-50193837 protein_coding
  ENST00000467787 GNAT1-004 50192698-50193173 retained_intron
  ENST00000481246 GNAT1-005 50193572-50194182 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLiverOvaryTestisENST00000232461ENST00000433068ENST00000440836ENST00000467787
Transcript ID Brain Breast Kidney Liver Ovary Testis
ENST00000232461 N/A N/A N/A 0.082±0.00 0.012±0.00 N/A
ENST00000433068 0.027±0.00 N/A 0.059±0.00 0.029±0.00 N/A 0.247±0.00
ENST00000440836 N/A 0.072±0.00 N/A N/A N/A N/A
ENST00000467787 N/A N/A 0.663±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FJ CIL_0003FJ_0002 CGP 3:50155045-50196516

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000035 ISS acyl binding
GO:0001580 IEA detection of chemical stimulus involved in sensory perception of bitter taste
GO:0001664 IBA G-protein coupled receptor binding
GO:0001750 IDA photoreceptor outer segment
GO:0001917 IDA photoreceptor inner segment
GO:0003924 NAS:IEA GTPase activity
GO:0004871 IEA:IBA signal transducer activity
GO:0005515 IEA protein binding
GO:0005525 ISS:IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005834 IBA heterotrimeric G-protein complex
GO:0005886 TAS plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0007165 NAS:IEA signal transduction
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007188 IBA adenylate cyclase-modulating G-protein coupled receptor signaling pathway
GO:0007601 TAS visual perception
GO:0007602 IEA phototransduction
GO:0007603 IMP phototransduction, visible light
GO:0008283 IEA cell proliferation
GO:0009416 ISS response to light stimulus
GO:0009642 IEA response to light intensity
GO:0016020 NAS membrane
GO:0016056 TAS rhodopsin mediated signaling pathway
GO:0016324 IEA apical plasma membrane
GO:0019001 IEA guanyl nucleotide binding
GO:0019003 ISS GDP binding
GO:0019901 ISS protein kinase binding
GO:0022400 TAS regulation of rhodopsin mediated signaling pathway
GO:0031683 IBA:IEA G-protein beta/gamma-subunit complex binding
GO:0032391 IEA photoreceptor connecting cilium
GO:0042462 IEA eye photoreceptor cell development
GO:0042622 ISS photoreceptor outer segment membrane
GO:0043025 IEA neuronal cell body
GO:0046872 IEA metal ion binding
GO:0050908 IMP detection of light stimulus involved in visual perception
GO:0050917 IBA sensory perception of umami taste
GO:0051343 IEA positive regulation of cyclic-nucleotide phosphodiesterase activity
GO:0051344 ISS negative regulation of cyclic-nucleotide phosphodiesterase activity
GO:0060041 IEA retina development in camera-type eye
GO:0071257 IEA cellular response to electrical stimulus
GO:0097381 TAS photoreceptor disc membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044199 gnat1 guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 protein_coding Danio_rerio
ENSMUSG00000034837 Gnat1 guanine nucleotide binding protein, alpha transducing 1 protein_coding Mus_musculus

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