C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000433068 GNAT1-002 ENSG00000114349 9606 + 3:50191670-50196515 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverTestisENST00000433068
Transcript ID Brain Kidney Liver Testis
ENST00000433068 0.027±0.00 0.059±0.00 0.029±0.00 0.247±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FJ CIL_0003FJ_0002 CGP 3:50155045-50196516

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000035 ISS acyl binding
GO:0001664 IBA G-protein coupled receptor binding
GO:0001750 IDA photoreceptor outer segment
GO:0001917 IDA photoreceptor inner segment
GO:0003924 NAS:IEA GTPase activity
GO:0004871 IEA:IBA signal transducer activity
GO:0005525 ISS:IEA GTP binding
GO:0005829 TAS cytosol
GO:0005834 IBA heterotrimeric G-protein complex
GO:0005886 TAS plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0007165 NAS:IEA signal transduction
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007188 IBA adenylate cyclase-modulating G-protein coupled receptor signaling pathway
GO:0007601 TAS visual perception
GO:0007603 IMP phototransduction, visible light
GO:0009416 ISS response to light stimulus
GO:0016020 NAS membrane
GO:0016056 TAS rhodopsin mediated signaling pathway
GO:0019001 IEA guanyl nucleotide binding
GO:0019003 ISS GDP binding
GO:0019901 ISS protein kinase binding
GO:0022400 TAS regulation of rhodopsin mediated signaling pathway
GO:0031683 IBA:IEA G-protein beta/gamma-subunit complex binding
GO:0042622 ISS photoreceptor outer segment membrane
GO:0046872 IEA metal ion binding
GO:0050908 IMP detection of light stimulus involved in visual perception
GO:0050917 IBA sensory perception of umami taste
GO:0051344 ISS negative regulation of cyclic-nucleotide phosphodiesterase activity
GO:0097381 TAS photoreceptor disc membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000010205 Gnat1-201 protein_coding Mus_musculus 0 1371
ENSMUST00000055704 Gnai2-201 protein_coding Mus_musculus 0 318
ENSMUST00000160421 Gnaz-003 processed_transcript Mus_musculus 0.00000004 64
ENSMUST00000159991 Gnaz-002 protein_coding Mus_musculus 0.00000004 64
ENSMUST00000037813 Gnaz-001 protein_coding Mus_musculus 0.00000004 64

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