C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: podocalyxin-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000114631 PODXL2 9606 + 3:127629181-127672809 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000342480 PODXL2-001 127629181-127672809 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000342480
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000342480 1.559±0.00 2.605±0.00 0.715±0.00 22.623±14.70 5.208±1.87 1.761±0.62 0.321±0.16 2.544±2.07 0.334±0.06 0.974±0.73 0.642±0.39 6.890±3.75 2.357±0.06 21.352±5.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EC CIL_0008EC_0001 VISTA 3:127070872-127672749

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005539 TAS glycosaminoglycan binding
GO:0005887 TAS integral component of plasma membrane
GO:0050901 IDA leukocyte tethering or rolling

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000033152 Podxl2 podocalyxin-like 2 protein_coding Mus_musculus

Loading