C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Kv channel interacting protein 3, calsenilin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115041 KCNIP3 9606 + 2:95297304-95386083 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295225 KCNIP3-001 95297304-95386083 protein_coding
  ENST00000360990 KCNIP3-201 95310222-95386076 protein_coding
  ENST00000377181 KCNIP3-003 95297347-95386077 processed_transcript
  ENST00000461336 KCNIP3-006 95297347-95303503 processed_transcript
  ENST00000468529 KCNIP3-004 95346728-95384049 protein_coding
  ENST00000475491 KCNIP3-002 95297338-95313896 retained_intron
  ENST00000486055 KCNIP3-005 95297327-95299120 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000295225ENST00000360990ENST00000468529ENST00000475491ENST00000486055
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000295225 N/A 3.375±0.82 N/A 0.544±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000360990 N/A 3.581±0.00 0.188±0.00 1.216±0.00 0.124±0.00 0.922±0.90 0.284±0.00 0.333±0.00 0.255±0.00 2.123±0.57 N/A
ENST00000468529 N/A N/A N/A N/A 0.568±0.00 N/A N/A 0.162±0.00 0.139±0.00 N/A 1.094±0.00
ENST00000475491 N/A N/A N/A 0.045±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000486055 1.405±0.00 N/A N/A N/A 0.140±0.00 N/A N/A N/A 1.368±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 TAS DNA binding
GO:0003714 TAS transcription corepressor activity
GO:0005244 IEA voltage-gated ion channel activity
GO:0005267 IEA potassium channel activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005829 IEA cytosol
GO:0005886 IEA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006886 IEA intracellular protein transport
GO:0006915 IEA apoptotic process
GO:0007165 TAS:IEA signal transduction
GO:0008022 IEA protein C-terminus binding
GO:0015459 IEA potassium channel regulator activity
GO:0019233 IEA sensory perception of pain
GO:0030424 IEA axon
GO:0030425 IEA dendrite
GO:0032993 IEA protein-DNA complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043523 IEA regulation of neuron apoptotic process
GO:0043565 IEA sequence-specific DNA binding
GO:0043679 IEA axon terminus
GO:0044325 IEA ion channel binding
GO:0048265 IEA response to pain
GO:0048266 IEA behavioral response to pain
GO:0048306 IEA calcium-dependent protein binding
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017880 kcnip3b Kv channel interacting protein 3b, calsenilin protein_coding Danio_rerio
ENSDARG00000076181 kcnip3a Kv channel interacting protein 3a, calsenilin protein_coding Danio_rerio
ENSMUSG00000079056 Kcnip3 Kv channel interacting protein 3, calsenilin protein_coding Mus_musculus

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