C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Kv channel interacting protein 3, calsenilin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000295225 KCNIP3-001 ENSG00000115041 9606 + 2:95297304-95386083 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonENST00000295225
Transcript ID Brain Colon
ENST00000295225 3.375±0.82 0.544±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 TAS DNA binding
GO:0003714 TAS transcription corepressor activity
GO:0005244 IEA voltage-gated ion channel activity
GO:0005267 IEA potassium channel activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005829 IEA cytosol
GO:0005886 IEA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006886 IEA intracellular protein transport
GO:0006915 IEA apoptotic process
GO:0007165 TAS:IEA signal transduction
GO:0008022 IEA protein C-terminus binding
GO:0015459 IEA potassium channel regulator activity
GO:0019233 IEA sensory perception of pain
GO:0030424 IEA axon
GO:0030425 IEA dendrite
GO:0032993 IEA protein-DNA complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043523 IEA regulation of neuron apoptotic process
GO:0043565 IEA sequence-specific DNA binding
GO:0043679 IEA axon terminus
GO:0044325 IEA ion channel binding
GO:0048265 IEA response to pain
GO:0048266 IEA behavioral response to pain
GO:0048306 IEA calcium-dependent protein binding
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103215 Kcnip3-003 protein_coding Mus_musculus 0 1000
ENSMUST00000028850 Kcnip3-001 protein_coding Mus_musculus 0 979
ENSMUST00000137625 Kcnip3-002 processed_transcript Mus_musculus 0 896
ENSMUST00000088538 Kcnip3-004 protein_coding Mus_musculus 0 826
ENSDART00000064581 kcnip3b-201 protein_coding Danio_rerio 0 473
ENSDART00000124751 kcnip3b-001 protein_coding Danio_rerio 0 473
ENSMUST00000079431 Kcnip2-201 protein_coding Mus_musculus 0 279
ENSMUST00000161886 Kcnip2-005 protein_coding Mus_musculus 0 279
ENSMUST00000026247 Kcnip2-001 protein_coding Mus_musculus 0 279
ENSMUST00000086993 Kcnip2-002 protein_coding Mus_musculus 0 279
ENSMUST00000162528 Kcnip2-003 protein_coding Mus_musculus 0 279
ENSMUST00000111906 Kcnip2-004 retained_intron Mus_musculus 0 279
ENSMUST00000159245 Kcnip2-006 protein_coding Mus_musculus 0 217
ENSMUST00000162661 Kcnip2-007 protein_coding Mus_musculus 5e-30 137
ENSMUST00000159210 Kcnip2-009 protein_coding Mus_musculus 9e-28 130

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