C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Kv channel interacting protein 3, calsenilin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000079056 Kcnip3 10090 - 2:127456498-127522094 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028850 Kcnip3-001 127456498-127521370 protein_coding
  ENSMUST00000088538 Kcnip3-004 127458130-127482499 protein_coding
  ENSMUST00000103215 Kcnip3-003 127456498-127521370 protein_coding
  ENSMUST00000137625 Kcnip3-002 127458240-127522094 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000028850ENSMUST00000088538ENSMUST00000103215ENSMUST00000137625
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028850 0.139±0.05 N/A 0.254±0.00 1.990±1.31 0.300±0.00 0.329±0.13 0.308±0.00 0.094±0.06 0.294±0.00 0.063±0.04 2.292±1.41 0.179±0.10 0.238±0.00
ENSMUST00000088538 N/A 1.031±0.00 N/A N/A 0.622±0.00 0.250±0.00 0.267±0.00 0.069±0.04 N/A 0.082±0.02 5.429±0.00 0.202±0.06 0.769±0.00
ENSMUST00000103215 1.141±0.03 0.425±0.00 1.053±0.06 7.864±4.54 0.467±0.11 0.211±0.06 N/A 0.105±0.05 0.185±0.00 0.032±0.01 2.443±1.24 0.212±0.17 0.341±0.02
ENSMUST00000137625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.053±0.00 0.331±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IDA DNA binding
GO:0005244 IEA voltage-gated ion channel activity
GO:0005267 IEA potassium channel activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005829 IDA cytosol
GO:0005886 IEA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006813 TAS potassium ion transport
GO:0006886 IEA intracellular protein transport
GO:0006915 IEA apoptotic process
GO:0008022 IPI protein C-terminus binding
GO:0015459 IEA potassium channel regulator activity
GO:0019233 IMP sensory perception of pain
GO:0030424 IEA axon
GO:0030425 IEA dendrite
GO:0032993 IEA protein-DNA complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043523 IDA regulation of neuron apoptotic process
GO:0043565 IEA sequence-specific DNA binding
GO:0043679 IEA axon terminus
GO:0044325 IEA ion channel binding
GO:0045892 TAS negative regulation of transcription, DNA-templated
GO:0048265 IMP response to pain
GO:0048266 IMP behavioral response to pain
GO:0048306 IPI calcium-dependent protein binding
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017880 kcnip3b Kv channel interacting protein 3b, calsenilin protein_coding Danio_rerio
ENSDARG00000076181 kcnip3a Kv channel interacting protein 3a, calsenilin protein_coding Danio_rerio
ENSG00000115041 KCNIP3 Kv channel interacting protein 3, calsenilin protein_coding Homo_sapiens

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