C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fibronectin type III domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115226 FNDC4 9606 - 2:27491883-27495245 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264703 FNDC4-001 27491883-27495245 protein_coding
  ENST00000476197 FNDC4-003 27492713-27494812 retained_intron
  ENST00000491414 FNDC4-002 27491901-27495162 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264703ENST00000476197ENST00000491414
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264703 23.270±0.00 3.826±0.00 16.935±15.84 7.710±7.56 3.883±3.26 1.496±0.00 5.351±0.00 47.689±47.41 4.395±0.00 0.043±0.00 20.706±19.40 3.821±0.00 6.444±4.68
ENST00000476197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.294±0.00 0.944±0.00 4.039±0.00
ENST00000491414 N/A N/A 1.536±0.00 N/A N/A N/A 0.623±0.00 N/A 0.517±0.45 N/A 0.440±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00010D CIL_00010D_0001 CGP 2:27444371-27495245
CIL_0001DA CIL_0001DA_0001 CGP 2:27491883-27523684

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005783 ISS endoplasmic reticulum
GO:0005886 ISS plasma membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009949 FNDC4 (1 of 2) fibronectin type III domain containing 4 protein_coding Danio_rerio
ENSDARG00000043396 fndc4a fibronectin type III domain containing 4a protein_coding Danio_rerio
ENSMUSG00000038552 Fndc4 fibronectin type III domain containing 4 protein_coding Mus_musculus

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