C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fibronectin type III domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038552 Fndc4 10090 - 5:31292255-31295877 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041266 Fndc4-201 31292886-31295871 protein_coding
  ENSMUST00000172435 Fndc4-202 31292255-31295877 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041266ENSMUST00000172435
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041266 2.856±2.36 2.347±0.56 2.062±0.00 30.082±21.05 1.354±0.23 0.614±0.00 1.268±0.35 1.657±0.50 11.603±10.25 0.991±0.00 0.238±0.07 10.337±4.72 8.903±6.02 0.666±0.48
ENSMUST00000172435 4.837±2.64 3.552±0.80 2.967±0.51 27.227±4.65 2.329±0.23 1.156±0.40 0.880±0.16 0.972±0.17 4.713±3.59 2.063±0.33 0.286±0.10 9.145±3.79 4.269±1.99 0.264±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00010D CIL_00010D_0002 CGP 5:31253280-31295877
CIL_0001DA CIL_0001DA_0002 CGP 5:31292255-31327300

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005783 IDA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009949 FNDC4 (1 of 2) fibronectin type III domain containing 4 protein_coding Danio_rerio
ENSDARG00000043396 fndc4a fibronectin type III domain containing 4a protein_coding Danio_rerio
ENSG00000115226 FNDC4 fibronectin type III domain containing 4 protein_coding Homo_sapiens

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