C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CAP-GLY domain containing linker protein family, member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115295 CLIP4 9606 + 2:29097705-29189643 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000320081 CLIP4-001 29115426-29183813 protein_coding
  ENST00000401605 CLIP4-003 29097705-29174713 protein_coding
  ENST00000401617 CLIP4-004 29097728-29189643 protein_coding
  ENST00000404424 CLIP4-005 29113996-29181923 protein_coding
  ENST00000415891 CLIP4-007 29097741-29174641 nonsense_mediated_decay
  ENST00000438819 CLIP4-011 29130671-29135618 protein_coding
  ENST00000449202 CLIP4-009 29118195-29135662 protein_coding
  ENST00000456385 CLIP4-006 29114878-29174712 nonsense_mediated_decay
  ENST00000471165 CLIP4-010 29130614-29131360 processed_transcript
  ENST00000481628 CLIP4-013 29175363-29181758 processed_transcript
  ENST00000491701 CLIP4-008 29121514-29132650 retained_intron
  ENST00000493551 CLIP4-012 29160366-29167876 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000320081ENST00000401605ENST00000401617ENST00000404424ENST00000415891
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000320081 5.329±0.00 2.756±0.00 6.405±0.49 3.649±2.79 7.396±0.00 5.057±2.48 2.742±0.00 1.371±0.94 4.007±0.10 16.796±0.00 5.096±2.37 3.002±0.79 3.001±0.42
ENST00000401605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.856±0.00 N/A N/A
ENST00000401617 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.077±0.00 N/A N/A 7.223±0.00
ENST00000404424 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.958±0.00 1.549±0.42 3.311±0.00 N/A
ENST00000415891 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.781±0.00 N/A N/A 6.325±3.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013S CIL_00013S_0001 CGP 2:29060976-29189643
CIL_00013T CIL_00013T_0001 CGP 2:29097705-29921566

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000024059 Clip4 CAP-GLY domain containing linker protein family, member 4 protein_coding Mus_musculus

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