C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carbohydrate sulfotransferase 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115526 CHST10 9606 - 2:100391860-100417656 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264249 CHST10-001 100391860-100417656 protein_coding
  ENST00000409046 CHST10-005 100397911-100417334 protein_coding
  ENST00000409701 CHST10-002 100393245-100417011 protein_coding
  ENST00000418201 CHST10-003 100402564-100417351 protein_coding
  ENST00000420858 CHST10-004 100397936-100415845 protein_coding
  ENST00000421474 CHST10-010 100398080-100417340 protein_coding
  ENST00000435960 CHST10-007 100406576-100417379 protein_coding
  ENST00000448989 CHST10-006 100398052-100417187 protein_coding
  ENST00000466583 CHST10-009 100415053-100417255 processed_transcript
  ENST00000484382 CHST10-012 100397908-100417454 processed_transcript
  ENST00000485085 CHST10-011 100407673-100417614 processed_transcript
  ENST00000487860 CHST10-013 100408174-100417411 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264249ENST00000409701ENST00000420858ENST00000484382ENST00000485085
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264249 1.559±0.00 2.662±0.00 N/A 4.862±0.79 1.983±0.00 0.499±0.00 1.383±1.23 2.621±0.00 0.250±0.00 0.569±0.27 0.883±0.00 3.485±3.17 3.433±1.19 4.056±0.68
ENST00000409701 N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 1.307±0.00 0.233±0.00 N/A 0.115±0.00 N/A N/A
ENST00000420858 N/A N/A N/A N/A N/A 0.373±0.00 N/A N/A N/A 1.340±0.00 0.105±0.00 1.425±0.00 N/A N/A
ENST00000484382 N/A N/A 0.391±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.921±0.00 N/A N/A
ENST00000485085 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.610±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HM CIL_0004HM_0001 CGP 2:100273291-100417656
CIL_0004HJ CIL_0004HJ_0001 CGP 2:100391860-100483280

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0007155 TAS cell adhesion
GO:0007612 IEA learning
GO:0007616 IEA long-term memory
GO:0008146 TAS:IEA sulfotransferase activity
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0016051 IEA carbohydrate biosynthetic process
GO:0016232 IEA HNK-1 sulfotransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031632 chst10 carbohydrate sulfotransferase 10 protein_coding Danio_rerio
ENSMUSG00000026080 Chst10 carbohydrate sulfotransferase 10 protein_coding Mus_musculus

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