C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004HM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170500-ENSG00000115526 CGP 9606 2:100273291-100417656
GeneTranscriptPositionBiotype
ENSG00000115526 (CHST10)
carbohydrate sulfotransferase 10 		ENST00000264249 (CHST10-001) 100391860-100417656 protein_coding
ENST00000409046 (CHST10-005) 100397911-100417334 protein_coding
ENST00000409701 (CHST10-002) 100393245-100417011 protein_coding
ENST00000418201 (CHST10-003) 100402564-100417351 protein_coding
ENST00000420858 (CHST10-004) 100397936-100415845 protein_coding
ENST00000421474 (CHST10-010) 100398080-100417340 protein_coding
ENST00000435960 (CHST10-007) 100406576-100417379 protein_coding
ENST00000448989 (CHST10-006) 100398052-100417187 protein_coding
ENST00000466583 (CHST10-009) 100415053-100417255 processed_transcript
ENST00000484382 (CHST10-012) 100397908-100417454 processed_transcript
ENST00000485085 (CHST10-011) 100407673-100417614 processed_transcript
ENST00000487860 (CHST10-013) 100408174-100417411 retained_intron
ENSG00000170500 (LONRF2)
LON peptidase N-terminal domain and ring finger 2 		ENST00000393437 (LONRF2-001) 100273291-100322733 protein_coding
ENST00000409647 (LONRF2-002) 100283542-100309505 protein_coding
CIL_0004HM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048814-ENSMUSG00000026080 CGP 10090 1:38793669-38898160
GeneTranscriptPositionBiotype
ENSMUSG00000026080 (Chst10)
carbohydrate sulfotransferase 10 		ENSMUST00000027249 (Chst10-201) 38863877-38898160 protein_coding
ENSMUSG00000048814 (Lonrf2)
LON peptidase N-terminal domain and ring finger 2 		ENSMUST00000039612 (Lonrf2-201) 38794509-38821215 protein_coding
ENSMUST00000147695 (Lonrf2-001) 38793669-38836090 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HM_0001ENSG00000115526ENST00000264249ENST00000409046ENST00000409701ENST00000418201ENST00000420858ENST00000421474ENST00000435960ENST00000448989ENST00000466583ENST00000484382ENST00000485085ENST00000487860ENSG00000170500ENST00000393437ENST00000409647CIL_0004HM_0002ENSMUSG00000026080ENSMUST00000027249ENSMUSG00000048814ENSMUST00000039612ENSMUST00000147695
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HM_0001ENSG00000115526ENST00000264249ENST00000409701ENST00000420858ENST00000484382ENST00000485085ENSG00000170500ENST00000393437ENST00000409647CIL_0004HM_0002ENSMUSG00000026080ENSMUST00000027249ENSMUSG00000048814ENSMUST00000039612ENSMUST00000147695
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115526 ENST00000264249 1.559±0.00 2.662±0.00 N/A 4.862±0.79 1.983±0.00 0.499±0.00 1.383±1.23 2.621±0.00 0.250±0.00 0.569±0.27 0.883±0.00 3.485±3.17 3.433±1.19 4.056±0.68
ENST00000409046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409701 N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 1.307±0.00 0.233±0.00 N/A 0.115±0.00 N/A N/A
ENST00000418201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420858 N/A N/A N/A N/A N/A 0.373±0.00 N/A N/A N/A 1.340±0.00 0.105±0.00 1.425±0.00 N/A N/A
ENST00000421474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484382 N/A N/A 0.391±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.921±0.00 N/A N/A
ENST00000485085 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.610±0.00 N/A N/A N/A N/A
ENST00000487860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000170500 ENST00000393437 N/A N/A 0.341±0.00 5.291±3.06 0.157±0.00 0.133±0.07 0.857±0.04 0.401±0.00 0.317±0.23 0.268±0.11 0.390±0.15 1.023±0.55 0.163±0.05 0.145±0.00
ENST00000409647 N/A N/A N/A 10.436±0.00 0.679±0.00 N/A 1.646±0.00 N/A 2.877±0.00 N/A 1.008±0.00 N/A 0.486±0.20 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026080 ENSMUST00000027249 0.752±0.54 0.450±0.27 1.750±0.26 8.371±2.29 0.836±0.41 0.485±0.11 0.094±0.03 0.119±0.04 0.031±0.02 0.120±0.04 0.103±0.10 2.386±0.83 0.360±0.15 0.591±0.26
ENSMUSG00000048814 ENSMUST00000039612 N/A N/A N/A 9.525±0.00 N/A N/A N/A N/A N/A N/A 0.025±0.01 0.244±0.00 0.046±0.02 N/A
ENSMUST00000147695 1.409±1.02 2.031±0.29 1.923±0.69 13.268±5.31 0.435±0.09 0.342±0.08 1.452±0.06 0.226±0.03 0.045±0.04 0.177±0.04 0.088±0.03 1.379±0.62 0.058±0.05 0.180±0.06

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