C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004HJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115526-ENSG00000204640 CGP 9606 2:100391860-100483280
GeneTranscriptPositionBiotype
ENSG00000115526 (CHST10)
carbohydrate sulfotransferase 10 		ENST00000264249 (CHST10-001) 100391860-100417656 protein_coding
ENST00000409046 (CHST10-005) 100397911-100417334 protein_coding
ENST00000409701 (CHST10-002) 100393245-100417011 protein_coding
ENST00000418201 (CHST10-003) 100402564-100417351 protein_coding
ENST00000420858 (CHST10-004) 100397936-100415845 protein_coding
ENST00000421474 (CHST10-010) 100398080-100417340 protein_coding
ENST00000435960 (CHST10-007) 100406576-100417379 protein_coding
ENST00000448989 (CHST10-006) 100398052-100417187 protein_coding
ENST00000466583 (CHST10-009) 100415053-100417255 processed_transcript
ENST00000484382 (CHST10-012) 100397908-100417454 processed_transcript
ENST00000485085 (CHST10-011) 100407673-100417614 processed_transcript
ENST00000487860 (CHST10-013) 100408174-100417411 retained_intron
ENSG00000238029 (AC012493.1)
 ENST00000453252 (AC012493.1-001) 100425348-100426107 processed_pseudogene
CIL_0004HJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026080-ENSMUSG00000067604 CGP 10090 1:38863877-38950278
GeneTranscriptPositionBiotype
ENSMUSG00000026080 (Chst10)
carbohydrate sulfotransferase 10 		ENSMUST00000027249 (Chst10-201) 38863877-38898160 protein_coding
ENSMUSG00000067604 (Nms)
neuromedin S 		ENSMUST00000088029 (Nms-001) 38939149-38950278 protein_coding
ENSMUST00000160214 (Nms-002) 38939203-38948643 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HJ_0001ENSG00000115526ENST00000264249ENST00000409046ENST00000409701ENST00000418201ENST00000420858ENST00000421474ENST00000435960ENST00000448989ENST00000466583ENST00000484382ENST00000485085ENST00000487860ENSG00000238029ENST00000453252CIL_0004HJ_0002ENSMUSG00000026080ENSMUST00000027249ENSMUSG00000067604ENSMUST00000088029ENSMUST00000160214
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HJ_0001ENSG00000115526ENST00000264249ENST00000409701ENST00000420858ENST00000484382ENST00000485085ENSG00000238029ENST00000453252CIL_0004HJ_0002ENSMUSG00000026080ENSMUST00000027249ENSMUSG00000067604ENSMUST00000088029ENSMUST00000160214
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115526 ENST00000264249 1.559±0.00 2.662±0.00 N/A 4.862±0.79 1.983±0.00 0.499±0.00 1.383±1.23 2.621±0.00 0.250±0.00 0.569±0.27 0.883±0.00 3.485±3.17 3.433±1.19 4.056±0.68
ENST00000409046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409701 N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 1.307±0.00 0.233±0.00 N/A 0.115±0.00 N/A N/A
ENST00000418201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420858 N/A N/A N/A N/A N/A 0.373±0.00 N/A N/A N/A 1.340±0.00 0.105±0.00 1.425±0.00 N/A N/A
ENST00000421474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484382 N/A N/A 0.391±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.921±0.00 N/A N/A
ENST00000485085 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.610±0.00 N/A N/A N/A N/A
ENST00000487860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000238029 ENST00000453252 0.015±0.00 N/A N/A 0.016±0.00 N/A 0.133±0.00 N/A 0.016±0.00 N/A N/A 0.015±0.00 N/A 0.024±0.00 0.023±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026080 ENSMUST00000027249 0.752±0.54 0.450±0.27 1.750±0.26 8.371±2.29 0.836±0.41 0.485±0.11 0.094±0.03 0.119±0.04 0.031±0.02 0.120±0.04 0.103±0.10 2.386±0.83 0.360±0.15 0.591±0.26
ENSMUSG00000067604 ENSMUST00000088029 N/A N/A 0.009±0.00 0.043±0.01 N/A N/A N/A N/A N/A N/A N/A N/A 0.038±0.01 0.071±0.03
ENSMUST00000160214 N/A N/A N/A 0.192±0.00 N/A N/A N/A N/A N/A N/A N/A 0.698±0.00 0.125±0.00 N/A

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