C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thyroid adenoma associated
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115970 THADA 9606 - 2:43230836-43596046 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000398653 THADA-003 43230852-43596038 nonsense_mediated_decay
  ENST00000402360 THADA-007 43552068-43592420 protein_coding
  ENST00000402796 THADA-010 43344122-43574813 nonsense_mediated_decay
  ENST00000403856 THADA-005 43562218-43596007 protein_coding
  ENST00000404790 THADA-004 43556093-43596023 protein_coding
  ENST00000405006 THADA-002 43230852-43595974 protein_coding
  ENST00000405975 THADA-001 43230836-43596046 protein_coding
  ENST00000407351 THADA-009 43230851-43570515 protein_coding
  ENST00000408045 THADA-021 43343001-43596038 nonsense_mediated_decay
  ENST00000436947 THADA-019 43484278-43508753 processed_transcript
  ENST00000462185 THADA-011 43505718-43541303 processed_transcript
  ENST00000467668 THADA-017 43231207-43277301 processed_transcript
  ENST00000469323 THADA-012 43428103-43486672 processed_transcript
  ENST00000473004 THADA-014 43333155-43398058 processed_transcript
  ENST00000474159 THADA-006 43556349-43592416 nonsense_mediated_decay
  ENST00000485018 THADA-016 43286985-43293066 retained_intron
  ENST00000485353 THADA-013 43344157-43463259 processed_transcript
  ENST00000486735 THADA-020 43292992-43391922 processed_transcript
  ENST00000497770 THADA-015 43344121-43372237 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000398653ENST00000402360ENST00000402796ENST00000403856ENST00000405006ENST00000405975ENST00000407351ENST00000474159
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000398653 N/A 1.148±0.00 1.513±0.00 N/A 0.894±0.00 N/A N/A N/A 0.879±0.00 1.073±0.00 1.475±0.00 N/A 0.796±0.00 N/A
ENST00000402360 N/A N/A N/A N/A 1.935±0.00 N/A N/A 2.125±0.00 2.923±0.00 N/A 1.181±0.00 7.401±0.00 N/A N/A
ENST00000402796 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.613±0.00 N/A 3.741±0.81 N/A N/A
ENST00000403856 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.879±0.00 N/A N/A N/A N/A
ENST00000405006 N/A N/A N/A 0.305±0.00 0.854±0.00 0.907±0.00 0.415±0.01 0.473±0.00 0.996±0.00 N/A N/A N/A 0.518±0.00 N/A
ENST00000405975 2.180±0.00 1.633±0.00 N/A 0.881±0.11 1.573±0.00 2.122±0.42 1.231±0.00 2.171±0.00 1.254±0.00 1.394±0.28 0.913±0.00 2.362±0.96 1.103±0.41 3.483±0.71
ENST00000407351 2.054±0.00 4.040±0.00 N/A 0.719±0.00 2.923±0.00 N/A 1.028±0.00 2.206±0.45 0.902±0.00 1.902±0.00 1.727±0.84 3.902±0.97 1.981±1.13 5.301±1.85
ENST00000474159 N/A N/A N/A N/A N/A N/A N/A 2.067±0.00 N/A N/A 0.931±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SZ CIL_0008SZ_0001 VISTA 2:42917582-43520159
CIL_0001XK CIL_0001XK_0001 CGP 2:43222402-43596046
CIL_0000GQ CIL_0000GQ_0001 CGP 2:43230836-43767987

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053082 thada thyroid adenoma associated protein_coding Danio_rerio
ENSMUSG00000024251 Thada thyroid adenoma associated protein_coding Mus_musculus

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