C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000GQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115970-ENSG00000152527 CGP 9606 2:43230836-43767987
GeneTranscriptPositionBiotype
ENSG00000115970 (THADA)
thyroid adenoma associated 		ENST00000398653 (THADA-003) 43230852-43596038 nonsense_mediated_decay
ENST00000402360 (THADA-007) 43552068-43592420 protein_coding
ENST00000402796 (THADA-010) 43344122-43574813 nonsense_mediated_decay
ENST00000403856 (THADA-005) 43562218-43596007 protein_coding
ENST00000404790 (THADA-004) 43556093-43596023 protein_coding
ENST00000405006 (THADA-002) 43230852-43595974 protein_coding
ENST00000405975 (THADA-001) 43230836-43596046 protein_coding
ENST00000407351 (THADA-009) 43230851-43570515 protein_coding
ENST00000408045 (THADA-021) 43343001-43596038 nonsense_mediated_decay
ENST00000436947 (THADA-019) 43484278-43508753 processed_transcript
ENST00000462185 (THADA-011) 43505718-43541303 processed_transcript
ENST00000467668 (THADA-017) 43231207-43277301 processed_transcript
ENST00000469323 (THADA-012) 43428103-43486672 processed_transcript
ENST00000473004 (THADA-014) 43333155-43398058 processed_transcript
ENST00000474159 (THADA-006) 43556349-43592416 nonsense_mediated_decay
ENST00000485018 (THADA-016) 43286985-43293066 retained_intron
ENST00000485353 (THADA-013) 43344157-43463259 processed_transcript
ENST00000486735 (THADA-020) 43292992-43391922 processed_transcript
ENST00000497770 (THADA-015) 43344121-43372237 processed_transcript
ENSG00000152527 (PLEKHH2)
pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 		ENST00000282406 (PLEKHH2-001) 43637273-43767987 protein_coding
ENST00000405000 (PLEKHH2-002) 43637308-43765792 retained_intron
ENST00000405223 (PLEKHH2-003) 43637300-43741365 retained_intron
ENST00000460356 (PLEKHH2-005) 43692230-43695204 retained_intron
ENST00000480103 (PLEKHH2-008) 43731541-43743870 retained_intron
ENST00000490038 (PLEKHH2-007) 43745899-43765482 nonsense_mediated_decay
ENST00000491692 (PLEKHH2-004) 43637339-43697239 nonsense_mediated_decay
ENST00000493408 (PLEKHH2-006) 43740985-43744134 retained_intron
ENSG00000223658 (AC011242.6)
 ENST00000475092 (AC011242.6-001) 43675380-43676322 processed_pseudogene
ENSG00000229695 (AC011242.5)
 ENST00000433596 (AC011242.5-001) 43680465-43681622 processed_pseudogene
ENSG00000252804 (RNU6-958P)
RNA, U6 small nuclear 958, pseudogene 		ENST00000516995 (RNU6-958P-201) 43408307-43408412 snRNA
ENSG00000264071 (RN7SL531P)
RNA, 7SL, cytoplasmic 531, pseudogene 		ENST00000578464 (RN7SL531P-201) 43492032-43492313 misc_RNA
CIL_0000GQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024251-ENSMUSG00000040852 CGP 10090 17:84190056-84622142
GeneTranscriptPositionBiotype
ENSMUSG00000024251 (Thada)
thyroid adenoma associated 		ENSMUST00000047524 (Thada-201) 84190056-84466196 protein_coding
ENSMUSG00000040852 (Plekhh2)
pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 		ENSMUST00000047206 (Plekhh2-201) 84511895-84622142 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000GQ_0001ENSG00000115970ENST00000398653ENST00000402360ENST00000402796ENST00000403856ENST00000404790ENST00000405006ENST00000405975ENST00000407351ENST00000408045ENST00000436947ENST00000462185ENST00000467668ENST00000469323ENST00000473004ENST00000474159ENST00000485018ENST00000485353ENST00000486735ENST00000497770ENSG00000152527ENST00000282406ENST00000405000ENST00000405223ENST00000460356ENST00000480103ENST00000490038ENST00000491692ENST00000493408ENSG00000223658ENST00000475092ENSG00000229695ENST00000433596ENSG00000252804ENST00000516995ENSG00000264071ENST00000578464CIL_0000GQ_0002ENSMUSG00000024251ENSMUST00000047524ENSMUSG00000040852ENSMUST00000047206
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000GQ_0001ENSG00000115970ENST00000398653ENST00000402360ENST00000402796ENST00000403856ENST00000405006ENST00000405975ENST00000407351ENST00000474159ENSG00000152527ENST00000282406ENST00000405000ENST00000405223ENST00000493408ENSG00000223658ENST00000475092ENSG00000229695ENST00000433596ENSG00000252804ENST00000516995ENSG00000264071ENST00000578464CIL_0000GQ_0002ENSMUSG00000024251ENSMUST00000047524ENSMUSG00000040852ENSMUST00000047206
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115970 ENST00000398653 N/A 1.148±0.00 1.513±0.00 N/A 0.894±0.00 N/A N/A N/A 0.879±0.00 1.073±0.00 1.475±0.00 N/A 0.796±0.00 N/A
ENST00000402360 N/A N/A N/A N/A 1.935±0.00 N/A N/A 2.125±0.00 2.923±0.00 N/A 1.181±0.00 7.401±0.00 N/A N/A
ENST00000402796 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.613±0.00 N/A 3.741±0.81 N/A N/A
ENST00000403856 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.879±0.00 N/A N/A N/A N/A
ENST00000404790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405006 N/A N/A N/A 0.305±0.00 0.854±0.00 0.907±0.00 0.415±0.01 0.473±0.00 0.996±0.00 N/A N/A N/A 0.518±0.00 N/A
ENST00000405975 2.180±0.00 1.633±0.00 N/A 0.881±0.11 1.573±0.00 2.122±0.42 1.231±0.00 2.171±0.00 1.254±0.00 1.394±0.28 0.913±0.00 2.362±0.96 1.103±0.41 3.483±0.71
ENST00000407351 2.054±0.00 4.040±0.00 N/A 0.719±0.00 2.923±0.00 N/A 1.028±0.00 2.206±0.45 0.902±0.00 1.902±0.00 1.727±0.84 3.902±0.97 1.981±1.13 5.301±1.85
ENST00000408045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474159 N/A N/A N/A N/A N/A N/A N/A 2.067±0.00 N/A N/A 0.931±0.00 N/A N/A N/A
ENST00000485018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000152527 ENST00000282406 1.037±0.00 0.327±0.00 N/A 0.325±0.09 1.479±0.10 1.612±0.00 0.142±0.00 0.809±0.00 0.776±0.70 6.075±1.23 0.056±0.02 2.092±1.11 0.418±0.16 1.324±0.13
ENST00000405000 N/A N/A N/A 0.093±0.00 N/A 0.301±0.00 0.071±0.00 N/A 0.877±0.00 N/A 0.033±0.00 0.851±0.41 0.149±0.00 0.545±0.00
ENST00000405223 N/A N/A N/A N/A N/A 1.363±0.00 N/A 0.644±0.00 1.114±0.00 6.458±0.00 N/A 1.412±0.00 N/A N/A
ENST00000460356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493408 N/A N/A N/A 3.120±0.00 N/A 7.401±0.00 N/A N/A N/A N/A 0.452±0.00 N/A N/A N/A
ENSG00000223658 ENST00000475092 0.067±0.00 N/A N/A 0.315±0.00 0.468±0.01 N/A 0.085±0.00 0.596±0.00 0.058±0.01 N/A N/A 0.567±0.33 0.332±0.02 2.061±0.69
ENSG00000229695 ENST00000433596 0.009±0.00 0.135±0.00 N/A 0.009±0.00 0.009±0.00 N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A N/A
ENSG00000252804 ENST00000516995 N/A N/A N/A N/A N/A N/A 0.186±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000264071 ENST00000578464 1.047±0.00 2.058±0.00 N/A 1.358±0.00 1.579±0.00 0.633±0.08 0.614±0.24 1.338±0.00 0.604±0.00 1.485±0.00 0.597±0.00 2.014±1.46 0.133±0.00 1.706±0.90
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024251 ENSMUST00000047524 2.610±1.26 2.708±0.73 1.982±0.25 1.939±0.82 2.080±0.92 0.755±0.29 1.019±0.11 1.520±0.45 1.102±0.55 2.300±0.83 0.796±0.15 2.868±1.27 1.352±0.44 3.510±1.40
ENSMUSG00000040852 ENSMUST00000047206 5.216±2.98 0.961±0.23 3.549±0.49 0.982±0.10 1.977±0.95 4.419±1.36 0.407±0.29 1.194±0.27 0.277±0.11 5.998±1.32 0.196±0.10 2.788±0.82 2.233±0.72 7.805±7.65

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