C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DnaJ (Hsp40) homolog, subfamily C, member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000116675 DNAJC6 9606 + 1:65248219-65415869 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263441 DNAJC6-201 65264694-65415869 protein_coding
  ENST00000371069 DNAJC6-002 65309545-65415276 protein_coding
  ENST00000395325 DNAJC6-001 65264754-65415869 protein_coding
  ENST00000463018 DNAJC6-004 65248219-65366194 processed_transcript
  ENST00000472787 DNAJC6-006 65366065-65379788 processed_transcript
  ENST00000483402 DNAJC6-005 65264764-65364761 processed_transcript
  ENST00000494710 DNAJC6-008 65254462-65392588 protein_coding
  ENST00000498720 DNAJC6-007 65384086-65388403 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371069ENST00000395325ENST00000463018ENST00000483402ENST00000494710
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371069 1.050±0.00 0.117±0.00 0.984±0.00 21.868±0.00 0.297±0.09 2.637±0.00 0.803±0.34 1.124±1.06 0.644±0.00 0.760±0.00 0.087±0.00 0.153±0.09 3.082±0.51 1.063±0.25
ENST00000395325 N/A N/A N/A 19.082±0.00 0.065±0.00 N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A
ENST00000463018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.941±0.00 N/A N/A N/A
ENST00000483402 N/A N/A N/A N/A 0.505±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494710 N/A N/A N/A N/A N/A 0.589±0.00 N/A N/A N/A N/A 0.417±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000266 CIL_000266_0001 CGP 1:65147549-65415869
CIL_000267 CIL_000267_0001 CGP 1:65248219-65436007

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IEA protein binding
GO:0005829 TAS cytosol
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0008219 IEA cell death
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0017124 IEA SH3 domain binding
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0045202 IEA synapse
GO:0061024 TAS membrane organization
GO:0072318 IEA clathrin coat disassembly
GO:2000369 IEA regulation of clathrin-mediated endocytosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079891 dnajc6 DnaJ (Hsp40) homolog, subfamily C, member 6 protein_coding Danio_rerio
ENSMUSG00000028528 Dnajc6 DnaJ (Hsp40) homolog, subfamily C, member 6 protein_coding Mus_musculus

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