C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DnaJ (Hsp40) homolog, subfamily C, member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028528 Dnajc6 10090 + 4:101496648-101642799 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038207 Dnajc6-002 101507871-101642799 protein_coding
  ENSMUST00000094953 Dnajc6-003 101550480-101642799 protein_coding
  ENSMUST00000106929 Dnajc6-201 101508000-101642798 protein_coding
  ENSMUST00000106930 Dnajc6-001 101496648-101642799 protein_coding
  ENSMUST00000106933 Dnajc6-202 101550594-101642782 protein_coding
  ENSMUST00000146489 Dnajc6-006 101508030-101599104 processed_transcript
  ENSMUST00000149047 Dnajc6-005 101507976-101611351 protein_coding
  ENSMUST00000154120 Dnajc6-004 101496685-101606603 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038207ENSMUST00000094953ENSMUST00000106929ENSMUST00000106930ENSMUST00000106933ENSMUST00000149047ENSMUST00000154120
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038207 N/A N/A N/A N/A 0.424±0.14 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000094953 N/A 0.264±0.06 0.366±0.00 5.536±2.46 N/A N/A N/A N/A N/A N/A N/A 0.287±0.06 N/A N/A
ENSMUST00000106929 0.124±0.01 0.760±0.20 0.373±0.00 9.446±4.53 0.177±0.00 0.337±0.25 N/A 4.636±1.38 0.038±0.02 0.497±0.23 N/A 0.658±0.36 0.654±0.45 N/A
ENSMUST00000106930 N/A 0.430±0.00 0.858±0.02 2.533±0.00 N/A N/A N/A 2.124±0.60 0.046±0.04 0.293±0.00 0.015±0.01 0.363±0.12 0.557±0.62 N/A
ENSMUST00000106933 N/A 0.502±0.00 0.320±0.00 4.876±0.57 0.273±0.20 0.293±0.11 N/A 0.794±0.00 0.092±0.00 N/A 0.014±0.01 0.442±0.13 N/A 0.319±0.00
ENSMUST00000149047 0.280±0.09 N/A N/A N/A N/A 0.602±0.00 N/A N/A 0.123±0.00 N/A 0.054±0.00 0.806±0.03 N/A 0.573±0.09
ENSMUST00000154120 N/A N/A N/A N/A N/A N/A 0.330±0.09 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000266 CIL_000266_0002 CGP 4:101419277-101642799
CIL_000267 CIL_000267_0002 CGP 4:101496648-101659364

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0017124 IEA SH3 domain binding
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0045202 IMP synapse
GO:0072318 IGI clathrin coat disassembly
GO:2000369 IMP regulation of clathrin-mediated endocytosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079891 dnajc6 DnaJ (Hsp40) homolog, subfamily C, member 6 protein_coding Danio_rerio
ENSG00000116675 DNAJC6 DnaJ (Hsp40) homolog, subfamily C, member 6 protein_coding Homo_sapiens

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