C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily C, member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371069 DNAJC6-002 ENSG00000116675 9606 + 1:65309545-65415276 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371069
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371069 1.050±0.00 0.117±0.00 0.984±0.00 21.868±0.00 0.297±0.09 2.637±0.00 0.803±0.34 1.124±1.06 0.644±0.00 0.760±0.00 0.087±0.00 0.153±0.09 3.082±0.51 1.063±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000266 CIL_000266_0001 CGP 1:65147549-65415869
CIL_000267 CIL_000267_0001 CGP 1:65248219-65436007

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IEA protein binding
GO:0005829 TAS cytosol
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0008219 IEA cell death
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0017124 IEA SH3 domain binding
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0045202 IEA synapse
GO:0061024 TAS membrane organization
GO:0072318 IEA clathrin coat disassembly
GO:2000369 IEA regulation of clathrin-mediated endocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094953 Dnajc6-003 protein_coding Mus_musculus 0 3675
ENSMUST00000106933 Dnajc6-202 protein_coding Mus_musculus 0 3611
ENSMUST00000106929 Dnajc6-201 protein_coding Mus_musculus 0 3376
ENSMUST00000038207 Dnajc6-002 protein_coding Mus_musculus 0 3376
ENSMUST00000106930 Dnajc6-001 protein_coding Mus_musculus 0 3374
ENSMUST00000149047 Dnajc6-005 protein_coding Mus_musculus 0 791
ENSMUST00000154120 Dnajc6-004 protein_coding Mus_musculus 0 477
ENSMUST00000146489 Dnajc6-006 processed_transcript Mus_musculus 0 239

Loading