C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: influenza virus NS1A binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000116679 IVNS1ABP 9606 - 1:185296388-185317329 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000367497 IVNS1ABP-006 185307680-185311127 protein_coding
  ENST00000367498 IVNS1ABP-001 185296388-185317329 protein_coding
  ENST00000422754 IVNS1ABP-007 185306750-185307662 protein_coding
  ENST00000459929 IVNS1ABP-002 185297015-185317273 processed_transcript
  ENST00000468217 IVNS1ABP-008 185300097-185300918 retained_intron
  ENST00000475046 IVNS1ABP-004 185297771-185301714 retained_intron
  ENST00000480769 IVNS1ABP-003 185296388-185306500 retained_intron
  ENST00000491112 IVNS1ABP-009 185300246-185301249 retained_intron
  ENST00000494880 IVNS1ABP-005 185298405-185301638 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367498ENST00000459929ENST00000475046ENST00000480769
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367498 14.084±0.00 2.373±0.00 11.288±0.00 5.453±0.82 4.500±1.30 13.171±0.00 3.838±0.63 12.394±9.10 3.518±0.40 8.694±3.31 2.515±1.34 8.351±1.77 7.349±2.79 7.255±1.57
ENST00000459929 22.033±0.00 3.236±0.00 N/A 4.310±0.00 1.951±0.00 12.984±0.00 5.297±0.00 11.673±0.00 3.082±0.00 17.300±0.00 1.981±0.00 6.377±3.22 3.628±0.56 4.666±0.49
ENST00000475046 N/A 5.640±0.00 N/A 4.428±0.41 7.520±0.00 10.758±0.00 2.473±0.00 8.650±5.81 3.654±0.11 12.187±2.25 1.998±0.23 24.918±16.35 8.578±0.00 12.139±7.34
ENST00000480769 N/A 2.167±0.00 N/A 2.086±0.00 2.335±0.00 N/A 2.294±0.00 5.128±0.00 N/A 4.449±0.00 N/A 4.688±0.00 1.294±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005667 TAS transcription factor complex
GO:0005681 TAS spliceosomal complex
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006383 TAS transcription from RNA polymerase III promoter
GO:0008380 TAS RNA splicing
GO:0009615 TAS response to virus
GO:0016032 IEA viral process
GO:2001243 IEA negative regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013946 ivns1abpb influenza virus NS1A binding protein b protein_coding Danio_rerio
ENSDARG00000031100 ivns1abpa influenza virus NS1A binding protein a protein_coding Danio_rerio
ENSMUSG00000023150 Ivns1abp influenza virus NS1A binding protein protein_coding Mus_musculus

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