C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: influenza virus NS1A binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367498 IVNS1ABP-001 ENSG00000116679 9606 - 1:185296388-185317329 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367498
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367498 14.084±0.00 2.373±0.00 11.288±0.00 5.453±0.82 4.500±1.30 13.171±0.00 3.838±0.63 12.394±9.10 3.518±0.40 8.694±3.31 2.515±1.34 8.351±1.77 7.349±2.79 7.255±1.57

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005667 TAS transcription factor complex
GO:0005681 TAS spliceosomal complex
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006383 TAS transcription from RNA polymerase III promoter
GO:0008380 TAS RNA splicing
GO:0009615 TAS response to virus
GO:0016032 IEA viral process
GO:2001243 IEA negative regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023918 Ivns1abp-001 protein_coding Mus_musculus 0 3812
ENSMUST00000097543 Ivns1abp-002 protein_coding Mus_musculus 0 2606
ENSMUST00000186745 Ivns1abp-004 nonsense_mediated_decay Mus_musculus 0 1905
ENSMUST00000111887 Ivns1abp-003 protein_coding Mus_musculus 0 1216
ENSMUST00000190872 Ivns1abp-005 protein_coding Mus_musculus 0 298

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