C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: influenza virus NS1A binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023150 Ivns1abp 10090 + 1:151344477-151364422 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023918 Ivns1abp-001 151344477-151364422 protein_coding
  ENSMUST00000097543 Ivns1abp-002 151344518-151364415 protein_coding
  ENSMUST00000111887 Ivns1abp-003 151344509-151356799 protein_coding
  ENSMUST00000186745 Ivns1abp-004 151344578-151363365 nonsense_mediated_decay
  ENSMUST00000190872 Ivns1abp-005 151361247-151362034 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023918ENSMUST00000097543ENSMUST00000111887ENSMUST00000186745ENSMUST00000190872
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023918 18.003±1.06 N/A 24.602±4.68 47.100±27.21 10.342±2.59 25.648±6.62 101.392±20.15 64.728±6.10 25.993±19.79 20.156±2.91 40.971±2.01 47.497±36.08 18.867±8.32 18.070±6.67
ENSMUST00000097543 N/A 19.120±6.62 N/A N/A 11.644±0.00 19.508±7.99 N/A N/A 2.857±0.41 12.040±0.00 N/A 27.266±0.00 N/A N/A
ENSMUST00000111887 N/A 38.580±17.12 N/A N/A 9.733±0.63 16.272±5.67 N/A N/A 2.901±0.00 N/A N/A 37.848±8.00 N/A N/A
ENSMUST00000186745 N/A N/A 6.177±2.19 22.328±9.71 14.655±2.50 23.867±0.00 52.135±6.18 19.395±0.00 15.607±12.97 N/A N/A 40.524±18.33 7.245±0.89 17.394±0.00
ENSMUST00000190872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.948±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065A CIL_00065A_0002 CGP 1:150562524-151364422
CIL_0001D4 CIL_0001D4_0002 CGP 1:151344477-151428455

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:2001243 IMP negative regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013946 ivns1abpb influenza virus NS1A binding protein b protein_coding Danio_rerio
ENSDARG00000031100 ivns1abpa influenza virus NS1A binding protein a protein_coding Danio_rerio
ENSG00000116679 IVNS1ABP influenza virus NS1A binding protein protein_coding Homo_sapiens

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