C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 2 (facilitated glucose transporter), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000117394 SLC2A1 9606 - 1:42925381-42958859 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372500 SLC2A1-003 42930319-42958859 protein_coding
  ENST00000415851 SLC2A1-004 42929347-42958829 protein_coding
  ENST00000426263 SLC2A1-001 42925381-42958830 protein_coding
  ENST00000439722 SLC2A1-005 42929148-42931125 protein_coding
  ENST00000460369 SLC2A1-002 42951690-42958859 processed_transcript
  ENST00000475162 SLC2A1-006 42926796-42931206 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372500ENST00000426263ENST00000439722
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372500 N/A N/A N/A N/A N/A N/A 0.654±0.00 N/A N/A N/A N/A N/A N/A
ENST00000426263 4.996±0.00 0.630±0.00 12.663±10.40 1.943±0.96 4.679±4.19 1.347±0.00 3.917±3.72 1.217±0.66 0.754±0.00 1.160±0.00 13.168±16.29 129.209±49.43 1.820±0.00
ENST00000439722 N/A N/A N/A N/A N/A N/A 9.236±0.00 N/A 1.275±0.00 1.860±0.00 28.846±0.00 131.749±0.00 2.584±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PM CIL_0008PM_0001 VISTA 1:42456139-43057783
CIL_0008N2 CIL_0008N2_0001 VISTA 1:42758169-43359178

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001939 IEA female pronucleus
GO:0005355 IDA glucose transmembrane transporter activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0005886 TAS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0005901 IEA caveola
GO:0005911 IEA cell-cell junction
GO:0005975 TAS carbohydrate metabolic process
GO:0006112 TAS energy reserve metabolic process
GO:0006461 IDA protein complex assembly
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0006970 IEA response to osmotic stress
GO:0008645 TAS hexose transport
GO:0015758 IDA glucose transport
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016323 IEA basolateral plasma membrane
GO:0019852 TAS L-ascorbic acid metabolic process
GO:0019900 IEA kinase binding
GO:0022857 IEA transmembrane transporter activity
GO:0022891 IEA substrate-specific transmembrane transporter activity
GO:0030496 IDA midbody
GO:0030864 IDA cortical actin cytoskeleton
GO:0031982 IEA vesicle
GO:0033300 IEA dehydroascorbic acid transporter activity
GO:0042149 IEA cellular response to glucose starvation
GO:0042802 IPI identical protein binding
GO:0042908 IEA xenobiotic transport
GO:0042910 IEA xenobiotic transporter activity
GO:0043621 IDA protein self-association
GO:0044281 TAS small molecule metabolic process
GO:0045121 IEA membrane raft
GO:0050796 TAS regulation of insulin secretion
GO:0055056 IEA D-glucose transmembrane transporter activity
GO:0055085 IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome
GO:0070837 IEA dehydroascorbic acid transport
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001437 slc2a1a solute carrier family 2 (facilitated glucose transporter), member 1a protein_coding Danio_rerio
ENSDARG00000007412 slc2a1b solute carrier family 2 (facilitated glucose transporter), member 1b protein_coding Danio_rerio
ENSMUSG00000028645 Slc2a1 solute carrier family 2 (facilitated glucose transporter), member 1 protein_coding Mus_musculus

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