C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 2 (facilitated glucose transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000426263 SLC2A1-001 ENSG00000117394 9606 - 1:42925381-42958830 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000426263
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000426263 4.996±0.00 0.630±0.00 12.663±10.40 1.943±0.96 4.679±4.19 1.347±0.00 3.917±3.72 1.217±0.66 0.754±0.00 1.160±0.00 13.168±16.29 129.209±49.43 1.820±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PM CIL_0008PM_0001 VISTA 1:42456139-43057783
CIL_0008N2 CIL_0008N2_0001 VISTA 1:42758169-43359178

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001939 IEA female pronucleus
GO:0005355 IDA glucose transmembrane transporter activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0005886 TAS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0005901 IEA caveola
GO:0005911 IEA cell-cell junction
GO:0005975 TAS carbohydrate metabolic process
GO:0006112 TAS energy reserve metabolic process
GO:0006461 IDA protein complex assembly
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0006970 IEA response to osmotic stress
GO:0008645 TAS hexose transport
GO:0015758 IDA glucose transport
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016323 IEA basolateral plasma membrane
GO:0019852 TAS L-ascorbic acid metabolic process
GO:0019900 IEA kinase binding
GO:0022857 IEA transmembrane transporter activity
GO:0022891 IEA substrate-specific transmembrane transporter activity
GO:0030496 IDA midbody
GO:0030864 IDA cortical actin cytoskeleton
GO:0031982 IEA vesicle
GO:0033300 IEA dehydroascorbic acid transporter activity
GO:0042149 IEA cellular response to glucose starvation
GO:0042802 IPI identical protein binding
GO:0042908 IEA xenobiotic transport
GO:0042910 IEA xenobiotic transporter activity
GO:0043621 IDA protein self-association
GO:0044281 TAS small molecule metabolic process
GO:0045121 IEA membrane raft
GO:0050796 TAS regulation of insulin secretion
GO:0055056 IEA D-glucose transmembrane transporter activity
GO:0055085 TAS:IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome
GO:0070837 IEA dehydroascorbic acid transport
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030398 Slc2a1-001 protein_coding Mus_musculus 0 2765
ENSMUST00000174372 Slc2a1-004 nonsense_mediated_decay Mus_musculus 0 1070
ENSDART00000025414 slc2a1a-001 protein_coding Danio_rerio 0 597
ENSMUST00000144329 Slc2a1-003 protein_coding Mus_musculus 0 468
ENSMUST00000134105 Slc2a1-002 protein_coding Mus_musculus 0 455
ENSMUST00000032476 Slc2a3-001 protein_coding Mus_musculus 0 353
ENSMUST00000165884 Slc2a3-008 protein_coding Mus_musculus 7e-34 150
ENSMUST00000171541 Slc2a3-007 nonsense_mediated_decay Mus_musculus 0.000000000000006 88
ENSMUST00000170724 Slc2a3-005 protein_coding Mus_musculus 0.00000000000008 84
ENSMUST00000168704 Slc2a3-002 retained_intron Mus_musculus 0.00000000000008 84
ENSDART00000016197 slc2a3a-201 protein_coding Danio_rerio 0.00000000005 75
ENSDART00000134816 slc2a3a-001 protein_coding Danio_rerio 0.00000000005 75
ENSMUST00000168801 Slc2a3-004 protein_coding Mus_musculus 0.000001 60
ENSMUST00000166135 Slc2a3-003 nonsense_mediated_decay Mus_musculus 0.000001 60

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