C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 2 (facilitated glucose transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372500 SLC2A1-003 ENSG00000117394 9606 - 1:42930319-42958859 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000372500
Transcript ID Kidney
ENST00000372500 0.654±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PM CIL_0008PM_0001 VISTA 1:42456139-43057783
CIL_0008N2 CIL_0008N2_0001 VISTA 1:42758169-43359178

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0022857 IEA transmembrane transporter activity
GO:0022891 IEA substrate-specific transmembrane transporter activity
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030398 Slc2a1-001 protein_coding Mus_musculus 0 649
ENSMUST00000174372 Slc2a1-004 nonsense_mediated_decay Mus_musculus 0 616
ENSMUST00000144329 Slc2a1-003 protein_coding Mus_musculus 0 468
ENSMUST00000134105 Slc2a1-002 protein_coding Mus_musculus 0 455
ENSMUST00000032476 Slc2a3-001 protein_coding Mus_musculus 4e-37 159
ENSMUST00000165884 Slc2a3-008 protein_coding Mus_musculus 2e-34 150
ENSMUST00000171541 Slc2a3-007 nonsense_mediated_decay Mus_musculus 0.000000000000002 88
ENSMUST00000170724 Slc2a3-005 protein_coding Mus_musculus 0.00000000000002 84
ENSMUST00000168704 Slc2a3-002 retained_intron Mus_musculus 0.00000000000002 84
ENSDART00000016197 slc2a3a-201 protein_coding Danio_rerio 0.00000000001 75
ENSDART00000134816 slc2a3a-001 protein_coding Danio_rerio 0.00000000001 75
ENSMUST00000168801 Slc2a3-004 protein_coding Mus_musculus 0.0000004 60
ENSMUST00000166135 Slc2a3-003 nonsense_mediated_decay Mus_musculus 0.0000004 60

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