C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: importin 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000117408 IPO13 9606 + 1:43946939-43968022 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372339 IPO13-002 43965939-43967752 protein_coding
  ENST00000372343 IPO13-001 43946939-43968022 protein_coding
  ENST00000480902 IPO13-006 43957109-43957549 processed_transcript
  ENST00000486876 IPO13-008 43967160-43967663 processed_transcript
  ENST00000489061 IPO13-004 43947555-43949545 processed_transcript
  ENST00000489773 IPO13-003 43947570-43956844 processed_transcript
  ENST00000492152 IPO13-005 43953217-43957549 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372339ENST00000372343ENST00000486876
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372339 N/A 2.662±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372343 2.331±0.00 1.324±0.00 1.728±0.00 17.622±10.66 2.771±1.72 2.619±0.97 9.724±7.45 6.202±5.08 2.113±1.72 1.943±1.26 27.736±19.78 6.062±3.09 6.480±0.49 24.099±19.07
ENST00000486876 N/A N/A N/A N/A N/A N/A N/A 2.297±0.00 1.763±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B8 CIL_0009B8_0001 VISTA 1:43734711-44337665

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006606 IDA protein import into nucleus
GO:0006886 IEA intracellular protein transport
GO:0008536 IEA Ran GTPase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060618 ipo13 importin 13 protein_coding Danio_rerio
ENSDARG00000076996 IPO13 (2 of 2) importin 13 protein_coding Danio_rerio
ENSMUSG00000033365 Ipo13 importin 13 protein_coding Mus_musculus

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