C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: importin 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372343 IPO13-001 ENSG00000117408 9606 + 1:43946939-43968022 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372343
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372343 2.331±0.00 1.324±0.00 1.728±0.00 17.622±10.66 2.771±1.72 2.619±0.97 9.724±7.45 6.202±5.08 2.113±1.72 1.943±1.26 27.736±19.78 6.062±3.09 6.480±0.49 24.099±19.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B8 CIL_0009B8_0001 VISTA 1:43734711-44337665

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006606 IDA protein import into nucleus
GO:0006886 IEA intracellular protein transport
GO:0008536 IEA Ran GTPase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036156 Ipo13-001 protein_coding Mus_musculus 0 4723
ENSDART00000085624 ipo13-201 protein_coding Danio_rerio 0 1493
ENSMUST00000153918 Ipo13-002 processed_transcript Mus_musculus 0 538
ENSMUST00000134752 Ipo13-006 processed_transcript Mus_musculus 0 462
ENSMUST00000140661 Ipo13-004 processed_transcript Mus_musculus 0 396
ENSMUST00000155524 Ipo13-005 processed_transcript Mus_musculus 0 309
ENSMUST00000136670 Ipo13-003 processed_transcript Mus_musculus 0 217

Loading