C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: importin 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033365 Ipo13 10090 - 4:117894486-117914999 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036156 Ipo13-001 117894486-117914999 protein_coding
  ENSMUST00000134752 Ipo13-006 117894486-117900662 processed_transcript
  ENSMUST00000136670 Ipo13-003 117895340-117895892 processed_transcript
  ENSMUST00000140661 Ipo13-004 117894892-117895873 processed_transcript
  ENSMUST00000153918 Ipo13-002 117900955-117903867 processed_transcript
  ENSMUST00000155524 Ipo13-005 117894627-117895114 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036156ENSMUST00000134752
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036156 24.474±2.51 16.781±3.56 13.672±0.67 21.457±9.90 25.479±8.37 16.294±2.93 26.370±7.62 17.211±2.54 8.017±3.54 28.385±2.98 67.285±3.44 19.435±9.86 5.761±2.27 61.386±27.99
ENSMUST00000134752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.518±0.00 19.848±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SF CIL_0008SF_0002 VISTA 4:117346906-117947610
CIL_0009B8 CIL_0009B8_0002 VISTA 4:117528714-118131599

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006606 ISO protein import into nucleus
GO:0008536 IEA Ran GTPase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060618 ipo13 importin 13 protein_coding Danio_rerio
ENSDARG00000076996 IPO13 (2 of 2) importin 13 protein_coding Danio_rerio
ENSG00000117408 IPO13 importin 13 protein_coding Homo_sapiens

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