C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family D (ALD), member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000117528 ABCD3 9606 + 1:94418455-94518666 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000315713 ABCD3-002 94418479-94478723 protein_coding
  ENST00000370214 ABCD3-001 94418455-94518663 protein_coding
  ENST00000464165 ABCD3-004 94513474-94518496 processed_transcript
  ENST00000468860 ABCD3-005 94418831-94475694 processed_transcript
  ENST00000484213 ABCD3-003 94481493-94518666 processed_transcript
  ENST00000493416 ABCD3-006 94480222-94487791 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370214ENST00000484213
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370214 6.829±0.00 3.513±0.00 13.771±0.00 11.817±1.66 7.016±1.15 11.483±4.68 8.639±1.90 18.755±3.65 13.947±7.21 4.871±1.50 5.054±1.17 5.898±1.65 4.881±1.53 7.755±2.52
ENST00000484213 N/A N/A N/A N/A N/A 2.641±0.00 N/A 2.607±0.00 N/A 1.802±0.00 N/A 0.810±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DI CIL_0009DI_0001 VISTA 1:93946469-94547443

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IDA ATP binding
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0005777 IDA peroxisome
GO:0005778 IDA peroxisomal membrane
GO:0005782 IDA peroxisomal matrix
GO:0005829 TAS cytosol
GO:0006200 IEA ATP catabolic process
GO:0006635 IGI fatty acid beta-oxidation
GO:0006810 IEA transport
GO:0007031 IDA peroxisome organization
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016887 IDA ATPase activity
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0042760 IGI very long-chain fatty acid catabolic process
GO:0042803 IDA protein homodimerization activity
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015167 abcd3a ATP-binding cassette, sub-family D (ALD), member 3a protein_coding Danio_rerio
ENSMUSG00000028127 Abcd3 ATP-binding cassette, sub-family D (ALD), member 3 protein_coding Mus_musculus

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